Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ACLV65_RS01240 | Genome accession | NZ_OZ217342 |
| Coordinates | 231972..232295 (+) | Length | 107 a.a. |
| NCBI ID | WP_172925580.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis B22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 226972..237295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV65_RS01215 (SMIB22_02360) | nagA | 227099..228250 (+) | 1152 | WP_001134549.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| ACLV65_RS01220 (SMIB22_02370) | - | 228413..229471 (+) | 1059 | WP_411864324.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ACLV65_RS01225 (SMIB22_02380) | - | 229622..229987 (+) | 366 | WP_000286405.1 | DUF1033 family protein | - |
| ACLV65_RS01230 (SMIB22_02390) | comGA/cglA/cilD | 230065..231006 (+) | 942 | WP_411864325.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV65_RS01235 (SMIB22_02400) | comGB/cglB | 230954..231970 (+) | 1017 | WP_411865197.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV65_RS01240 (SMIB22_02410) | comGC/cglC | 231972..232295 (+) | 324 | WP_172925580.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACLV65_RS01245 (SMIB22_02420) | comGD/cglD | 232258..232692 (+) | 435 | WP_411864326.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV65_RS01250 (SMIB22_02430) | comGE/cglE | 232655..232957 (+) | 303 | WP_411864327.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV65_RS01255 (SMIB22_02440) | comGF/cglF | 232920..233381 (+) | 462 | WP_173234886.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV65_RS01260 (SMIB22_02450) | comGG/cglG | 233359..233772 (+) | 414 | WP_411864328.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV65_RS01265 (SMIB22_02460) | - | 233805..234392 (+) | 588 | WP_411864329.1 | class I SAM-dependent methyltransferase | - |
| ACLV65_RS01270 (SMIB22_02470) | comYH | 234453..235406 (+) | 954 | WP_411864330.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV65_RS01275 (SMIB22_02480) | - | 235456..236646 (+) | 1191 | WP_411864331.1 | acetate kinase | - |
| ACLV65_RS01280 (SMIB22_02490) | rnpA | 236796..237167 (+) | 372 | WP_173282963.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12044.18 Da Isoelectric Point: 9.6932
>NTDB_id=1170086 ACLV65_RS01240 WP_172925580.1 231972..232295(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis B22]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEEATLSKLQA
DDRITEEQAKAYKEYHAKQNTSQTVAD
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEEATLSKLQA
DDRITEEQAKAYKEYHAKQNTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=1170086 ACLV65_RS01240 WP_172925580.1 231972..232295(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis B22]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACACTTGTGGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCGGTCAATGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGTCAGGCAGAGCTTTATAGTTTAGATAAAAATGAAGAGGCTACTCTAAGCAAATTACAAGCA
GATGATCGCATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACACTTGTGGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCGGTCAATGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGTCAGGCAGAGCTTTATAGTTTAGATAAAAATGAAGAGGCTACTCTAAGCAAATTACAAGCA
GATGATCGCATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
97.196 |
100 |
0.972 |
| comGC/cglC | Streptococcus mitis SK321 |
90.291 |
96.262 |
0.869 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
88.35 |
96.262 |
0.85 |
| comGC/cglC | Streptococcus pneumoniae D39 |
88.35 |
96.262 |
0.85 |
| comGC/cglC | Streptococcus pneumoniae R6 |
88.35 |
96.262 |
0.85 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
87.379 |
96.262 |
0.841 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
68.571 |
98.131 |
0.673 |
| comYC | Streptococcus mutans UA140 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus mutans UA159 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus suis isolate S10 |
71.605 |
75.701 |
0.542 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
53.465 |
94.393 |
0.505 |
| comGC | Staphylococcus aureus MW2 |
48.837 |
80.374 |
0.393 |
| comGC | Staphylococcus aureus N315 |
48.837 |
80.374 |
0.393 |