Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACLV65_RS01270 | Genome accession | NZ_OZ217342 |
| Coordinates | 234453..235406 (+) | Length | 317 a.a. |
| NCBI ID | WP_411864330.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis B22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 229453..240406
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV65_RS01225 (SMIB22_02380) | - | 229622..229987 (+) | 366 | WP_000286405.1 | DUF1033 family protein | - |
| ACLV65_RS01230 (SMIB22_02390) | comGA/cglA/cilD | 230065..231006 (+) | 942 | WP_411864325.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV65_RS01235 (SMIB22_02400) | comGB/cglB | 230954..231970 (+) | 1017 | WP_411865197.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV65_RS01240 (SMIB22_02410) | comGC/cglC | 231972..232295 (+) | 324 | WP_172925580.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACLV65_RS01245 (SMIB22_02420) | comGD/cglD | 232258..232692 (+) | 435 | WP_411864326.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV65_RS01250 (SMIB22_02430) | comGE/cglE | 232655..232957 (+) | 303 | WP_411864327.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV65_RS01255 (SMIB22_02440) | comGF/cglF | 232920..233381 (+) | 462 | WP_173234886.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV65_RS01260 (SMIB22_02450) | comGG/cglG | 233359..233772 (+) | 414 | WP_411864328.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV65_RS01265 (SMIB22_02460) | - | 233805..234392 (+) | 588 | WP_411864329.1 | class I SAM-dependent methyltransferase | - |
| ACLV65_RS01270 (SMIB22_02470) | comYH | 234453..235406 (+) | 954 | WP_411864330.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV65_RS01275 (SMIB22_02480) | - | 235456..236646 (+) | 1191 | WP_411864331.1 | acetate kinase | - |
| ACLV65_RS01280 (SMIB22_02490) | rnpA | 236796..237167 (+) | 372 | WP_173282963.1 | ribonuclease P protein component | - |
| ACLV65_RS01285 (SMIB22_02500) | - | 237142..237966 (+) | 825 | WP_200893270.1 | membrane protein insertase YidC | - |
| ACLV65_RS01290 (SMIB22_02510) | jag | 237984..238970 (+) | 987 | WP_050243354.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ACLV65_RS01295 (SMIB22_02520) | - | 239021..239644 (+) | 624 | WP_411864332.1 | HI_0552 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35606.77 Da Isoelectric Point: 4.2706
>NTDB_id=1170091 ACLV65_RS01270 WP_411864330.1 234453..235406(+) (comYH) [Streptococcus mitis isolate S. mitis B22]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKDNNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLGKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVETFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKDNNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLGKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVETFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1170091 ACLV65_RS01270 WP_411864330.1 234453..235406(+) (comYH) [Streptococcus mitis isolate S. mitis B22]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAATAGTATCTATCTGGATGGTGAGACTGAGCTAGAACAGGTCAAAGACAACAATC
AAACCCTTAAACGCTTAGCACTTCGCAAAGAAGAATGGCTCAAAACCTACCAGTTTCTCTTGATGAAAGCTGGGCAAACA
GAGCCCCTACAGGCCAATCACCAGTTTACACCAGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAGGAGTTGTTTAA
AGAGGAGGAAATAACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGCGCTACTTTCTTGACCTCGCTTGGTAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCGGCAAGCATGGCAGATGTGATTGGTTTGCAG
GCTGGTTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTCGG
CTATTATCCTGATGATGCCGTTGCGTCGCGTCATCAAGTTGCTTCTAGTCAAGAACATACCTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTACCTCAAGTCAGATGGATATGCTATTTTTCTCGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGACTTGTTGAAAGGCTGGTTGAAAGAAGAAGCAAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGCAGTAGAGACTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAATAGTATCTATCTGGATGGTGAGACTGAGCTAGAACAGGTCAAAGACAACAATC
AAACCCTTAAACGCTTAGCACTTCGCAAAGAAGAATGGCTCAAAACCTACCAGTTTCTCTTGATGAAAGCTGGGCAAACA
GAGCCCCTACAGGCCAATCACCAGTTTACACCAGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAGGAGTTGTTTAA
AGAGGAGGAAATAACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGCGCTACTTTCTTGACCTCGCTTGGTAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCGGCAAGCATGGCAGATGTGATTGGTTTGCAG
GCTGGTTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTCGG
CTATTATCCTGATGATGCCGTTGCGTCGCGTCATCAAGTTGCTTCTAGTCAAGAACATACCTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTACCTCAAGTCAGATGGATATGCTATTTTTCTCGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGACTTGTTGAAAGGCTGGTTGAAAGAAGAAGCAAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGCAGTAGAGACTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.952 |
98.738 |
0.543 |
| comYH | Streptococcus mutans UA159 |
54.633 |
98.738 |
0.539 |