Detailed information NTG1170087

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ACLV65_RS01245
• Genome accession: NZ_OZ217342
• Coordinates: 232258..232692 (+)
• Length: 144 a.a.
• NCBI ID: WP_411864326.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis B22
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 227258..237692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV65_RS01220 (SMIB22_02370)	-	228413..229471 (+)	1059	WP_411864324.1	zinc-dependent alcohol dehydrogenase family protein	-
ACLV65_RS01225 (SMIB22_02380)	-	229622..229987 (+)	366	WP_000286405.1	DUF1033 family protein	-
ACLV65_RS01230 (SMIB22_02390)	comGA/cglA/cilD	230065..231006 (+)	942	WP_411864325.1	competence type IV pilus ATPase ComGA	Machinery gene
ACLV65_RS01235 (SMIB22_02400)	comGB/cglB	230954..231970 (+)	1017	WP_411865197.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACLV65_RS01240 (SMIB22_02410)	comGC/cglC	231972..232295 (+)	324	WP_172925580.1	competence type IV pilus major pilin ComGC	Machinery gene
ACLV65_RS01245 (SMIB22_02420)	comGD/cglD	232258..232692 (+)	435	WP_411864326.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACLV65_RS01250 (SMIB22_02430)	comGE/cglE	232655..232957 (+)	303	WP_411864327.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACLV65_RS01255 (SMIB22_02440)	comGF/cglF	232920..233381 (+)	462	WP_173234886.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACLV65_RS01260 (SMIB22_02450)	comGG/cglG	233359..233772 (+)	414	WP_411864328.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACLV65_RS01265 (SMIB22_02460)	-	233805..234392 (+)	588	WP_411864329.1	class I SAM-dependent methyltransferase	-
ACLV65_RS01270 (SMIB22_02470)	comYH	234453..235406 (+)	954	WP_411864330.1	class I SAM-dependent methyltransferase	Machinery gene
ACLV65_RS01275 (SMIB22_02480)	-	235456..236646 (+)	1191	WP_411864331.1	acetate kinase	-
ACLV65_RS01280 (SMIB22_02490)	rnpA	236796..237167 (+)	372	WP_173282963.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15724.18 Da
• Isoelectric Point: 10.3019

>NTDB_id=1170087 ACLV65_RS01245 WP_411864326.1 232258..232692(+) (comGD/cglD) [Streptococcus mitis isolate S. mitis B22]
MLNKIPVKPLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKHSVASQQKTSLSIDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1170087 ACLV65_RS01245 WP_411864326.1 232258..232692(+) (comGD/cglD) [Streptococcus mitis isolate S. mitis B22]
ATGCTAAACAAAATACCAGTCAAACCGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGCCTCTTGGTTTTGGGACTGGT
GAGTATTCTTGCCTTGGGCCTATCTGGCTCTGTCCAGTCCACTTTTGCGGCAGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACTCAAAAACACAGTGTGGCTAGTCAGCAAAAGACAAGTTTGAGCATAGACGGACAGACC
ATTAGCAATGGCAGTCAAAAGCTGACAGTTCCTAAAGGAATTCAGGCGCCATCAGGACAAAGTATCACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACAAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	96.528	100	0.965
comGD/cglD	Streptococcus pneumoniae Rx1	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae D39	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae R6	96.241	92.361	0.889
comGD/cglD	Streptococcus mitis SK321	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae TIGR4	95.489	92.361	0.882
comYD	Streptococcus gordonii str. Challis substr. CH1	57.463	93.056	0.535
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437