Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ACLV7Q_RS01065 | Genome accession | NZ_OZ217341 |
| Coordinates | 202519..202842 (+) | Length | 107 a.a. |
| NCBI ID | WP_218757954.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis C22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 197519..207842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7Q_RS01040 (SMIC22_01980) | nagA | 197648..198799 (+) | 1152 | WP_218757951.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| ACLV7Q_RS01045 (SMIC22_01990) | - | 198962..200020 (+) | 1059 | WP_218757952.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ACLV7Q_RS01050 (SMIC22_02000) | - | 200170..200535 (+) | 366 | WP_045606653.1 | DUF1033 family protein | - |
| ACLV7Q_RS01055 (SMIC22_02010) | comGA/cglA/cilD | 200612..201553 (+) | 942 | WP_218757953.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7Q_RS01060 (SMIC22_02020) | comGB/cglB | 201501..202517 (+) | 1017 | WP_218757970.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7Q_RS01065 (SMIC22_02030) | comGC/cglC | 202519..202842 (+) | 324 | WP_218757954.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACLV7Q_RS01070 (SMIC22_02040) | comGD/cglD | 202805..203239 (+) | 435 | WP_218757955.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7Q_RS01075 (SMIC22_02050) | comGE/cglE | 203202..203504 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7Q_RS01080 (SMIC22_02060) | comGF/cglF | 203467..203928 (+) | 462 | WP_218757956.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7Q_RS01085 (SMIC22_02070) | comGG/cglG | 203906..204319 (+) | 414 | WP_218757957.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7Q_RS01090 (SMIC22_02080) | - | 204352..204939 (+) | 588 | WP_218757958.1 | class I SAM-dependent methyltransferase | - |
| ACLV7Q_RS01095 (SMIC22_02090) | comYH | 205000..205953 (+) | 954 | WP_218757959.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7Q_RS01100 (SMIC22_02100) | - | 206004..207194 (+) | 1191 | WP_218757960.1 | acetate kinase | - |
| ACLV7Q_RS01105 (SMIC22_02110) | rnpA | 207344..207715 (+) | 372 | WP_000739245.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12029.21 Da Isoelectric Point: 10.0527
>NTDB_id=1170004 ACLV7Q_RS01065 WP_218757954.1 202519..202842(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis C22]
MKKMMTFLKKSKVKAFTLVEMLVVLLIISVLLLLFLPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNKTQTVAD
MKKMMTFLKKSKVKAFTLVEMLVVLLIISVLLLLFLPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNKTQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=1170004 ACLV7Q_RS01065 WP_218757954.1 202519..202842(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis C22]
ATGAAAAAAATGATGACATTCTTGAAAAAATCTAAGGTTAAAGCTTTCACTCTGGTAGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTACTTCTCTTGCTTTTTCTACCTAATCTGACCAAACAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTGGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGAGAATCACAGAAGAACAAGCTAAAGCTTATAAAGAATATCATGCAAAACAAAATAAGACTCAAACGGTCGCGGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAATCTAAGGTTAAAGCTTTCACTCTGGTAGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTACTTCTCTTGCTTTTTCTACCTAATCTGACCAAACAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTGGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGAGAATCACAGAAGAACAAGCTAAAGCTTATAAAGAATATCATGCAAAACAAAATAAGACTCAAACGGTCGCGGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
96.262 |
100 |
0.963 |
| comGC/cglC | Streptococcus mitis SK321 |
95.918 |
91.589 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
92 |
93.458 |
0.86 |
| comGC/cglC | Streptococcus pneumoniae D39 |
92 |
93.458 |
0.86 |
| comGC/cglC | Streptococcus pneumoniae R6 |
92 |
93.458 |
0.86 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
91 |
93.458 |
0.85 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
69.524 |
98.131 |
0.682 |
| comYC | Streptococcus mutans UA140 |
65.385 |
97.196 |
0.636 |
| comYC | Streptococcus mutans UA159 |
65.385 |
97.196 |
0.636 |
| comYC | Streptococcus suis isolate S10 |
69.136 |
75.701 |
0.523 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
90.654 |
0.514 |
| comGC | Staphylococcus aureus MW2 |
51.163 |
80.374 |
0.411 |
| comGC | Staphylococcus aureus N315 |
51.163 |
80.374 |
0.411 |