Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACLV7Q_RS01095 | Genome accession | NZ_OZ217341 |
| Coordinates | 205000..205953 (+) | Length | 317 a.a. |
| NCBI ID | WP_218757959.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis C22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 200000..210953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7Q_RS01050 (SMIC22_02000) | - | 200170..200535 (+) | 366 | WP_045606653.1 | DUF1033 family protein | - |
| ACLV7Q_RS01055 (SMIC22_02010) | comGA/cglA/cilD | 200612..201553 (+) | 942 | WP_218757953.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7Q_RS01060 (SMIC22_02020) | comGB/cglB | 201501..202517 (+) | 1017 | WP_218757970.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7Q_RS01065 (SMIC22_02030) | comGC/cglC | 202519..202842 (+) | 324 | WP_218757954.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACLV7Q_RS01070 (SMIC22_02040) | comGD/cglD | 202805..203239 (+) | 435 | WP_218757955.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7Q_RS01075 (SMIC22_02050) | comGE/cglE | 203202..203504 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7Q_RS01080 (SMIC22_02060) | comGF/cglF | 203467..203928 (+) | 462 | WP_218757956.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7Q_RS01085 (SMIC22_02070) | comGG/cglG | 203906..204319 (+) | 414 | WP_218757957.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7Q_RS01090 (SMIC22_02080) | - | 204352..204939 (+) | 588 | WP_218757958.1 | class I SAM-dependent methyltransferase | - |
| ACLV7Q_RS01095 (SMIC22_02090) | comYH | 205000..205953 (+) | 954 | WP_218757959.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7Q_RS01100 (SMIC22_02100) | - | 206004..207194 (+) | 1191 | WP_218757960.1 | acetate kinase | - |
| ACLV7Q_RS01105 (SMIC22_02110) | rnpA | 207344..207715 (+) | 372 | WP_000739245.1 | ribonuclease P protein component | - |
| ACLV7Q_RS01110 (SMIC22_02120) | - | 207690..208514 (+) | 825 | WP_218757961.1 | membrane protein insertase YidC | - |
| ACLV7Q_RS01115 (SMIC22_02130) | jag | 208532..209518 (+) | 987 | WP_218757962.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ACLV7Q_RS01120 (SMIC22_02140) | - | 209569..210192 (+) | 624 | WP_218757971.1 | ribonuclease P | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35663.86 Da Isoelectric Point: 4.2474
>NTDB_id=1170009 ACLV7Q_RS01095 WP_218757959.1 205000..205953(+) (comYH) [Streptococcus mitis isolate S. mitis C22]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSLQ
SDLLKGWLKEEASLTAMISLPENLFASAKQSKTIFILQKKSEIVVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSLQ
SDLLKGWLKEEASLTAMISLPENLFASAKQSKTIFILQKKSEIVVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1170009 ACLV7Q_RS01095 WP_218757959.1 205000..205953(+) (comYH) [Streptococcus mitis isolate S. mitis C22]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTTCAAGTCATCCAAAGTGACTTGGCGACCAA
TTTTTATGATGCCTTGGTGGAGCAAAACAGCATTTATCTGGATGGTGAGACTGAGTTAGAGCAGGTCAAGGAGAACAATC
AAGCCCTTAAGCGTTTAGCACTTCGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCGGGGCAGACA
GAGCCCCTGCAGGCCAATCACCAATTTACACCGGATGCTATTGCCTTACTTTTGGTGTTTATTGTGGAGGAATTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGGTCTGGCATGGGGATTCTGGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTAGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGATGTAATTGGTTTACAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGCGACTTGCCTGTCGG
TTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTTA
TGGAACAAGGACTTAAGTACCTCAAGTCAGATGGATATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCTTCAA
AGTGATTTGTTGAAAGGCTGGTTGAAAGAAGAAGCAAGTCTGACTGCCATGATTAGTTTGCCTGAAAATCTCTTTGCTAG
TGCCAAACAATCCAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGTAGTAGAACCCTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTTCAAGTCATCCAAAGTGACTTGGCGACCAA
TTTTTATGATGCCTTGGTGGAGCAAAACAGCATTTATCTGGATGGTGAGACTGAGTTAGAGCAGGTCAAGGAGAACAATC
AAGCCCTTAAGCGTTTAGCACTTCGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCGGGGCAGACA
GAGCCCCTGCAGGCCAATCACCAATTTACACCGGATGCTATTGCCTTACTTTTGGTGTTTATTGTGGAGGAATTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGGTCTGGCATGGGGATTCTGGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTAGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGATGTAATTGGTTTACAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGCGACTTGCCTGTCGG
TTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTTA
TGGAACAAGGACTTAAGTACCTCAAGTCAGATGGATATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCTTCAA
AGTGATTTGTTGAAAGGCTGGTTGAAAGAAGAAGCAAGTCTGACTGCCATGATTAGTTTGCCTGAAAATCTCTTTGCTAG
TGCCAAACAATCCAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGTAGTAGAACCCTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
55.272 |
98.738 |
0.546 |
| comYH | Streptococcus mutans UA159 |
54.952 |
98.738 |
0.543 |