Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | EL220_RS02735 | Genome accession | NZ_LR134388 |
| Coordinates | 613209..614321 (+) | Length | 370 a.a. |
| NCBI ID | WP_027270761.1 | Uniprot ID | A0A0W0YND9 |
| Organism | Legionella sainthelensi strain NCTC11988 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 608209..619321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL220_RS02710 (NCTC11988_00559) | bioC | 608444..609301 (+) | 858 | WP_027270756.1 | malonyl-ACP O-methyltransferase BioC | - |
| EL220_RS02715 (NCTC11988_00560) | - | 609488..610285 (-) | 798 | WP_035905958.1 | LirA/MavJ family T4SS effector | - |
| EL220_RS02720 (NCTC11988_00561) | - | 610416..611297 (-) | 882 | WP_027270758.1 | polyprenyl synthetase family protein | - |
| EL220_RS02725 (NCTC11988_00562) | - | 611290..611508 (-) | 219 | WP_027270759.1 | exodeoxyribonuclease VII small subunit | - |
| EL220_RS02730 (NCTC11988_00563) | radA | 611684..613036 (+) | 1353 | WP_027270760.1 | DNA repair protein RadA | - |
| EL220_RS02735 (NCTC11988_00564) | pilU | 613209..614321 (+) | 1113 | WP_027270761.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| EL220_RS02740 (NCTC11988_00565) | ankK | 614380..616296 (+) | 1917 | WP_027270762.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 41432.83 Da Isoelectric Point: 5.4545
>NTDB_id=1122608 EL220_RS02735 WP_027270761.1 613209..614321(+) (pilU) [Legionella sainthelensi strain NCTC11988]
MDITPFFKLMVDKSASDLFFSVGAPPNIKIEGVILPIGHVPLKAQQMAEIALSLMNDDQRKEFEATMELNMGLSIPAVGR
FRINLFRQRGDISMVVRYIKNKIPSIEQLNLPPILKSIVMELRGLVLVVGATGSGKSTTLAAMIDYRNQNQSGHILTIED
PIEFLHQHKKSIVDQREVGIDTMSYDNALVNAMREAPDVILIGEIRERNAMKHAIAYAETGHLCISTLHANNANQAMDRI
INFFPEDARKQVLLDLSLNLRAIISMRLIPGVNHQRMVAVEILLNTPYVSDLIEKGKIDEIKEVMERSTEQGMQTFDQAL
LELYKNGLISEENAIKYADSKNNVGLQIRLNSGKNFDSPEGDLTIESDEH
MDITPFFKLMVDKSASDLFFSVGAPPNIKIEGVILPIGHVPLKAQQMAEIALSLMNDDQRKEFEATMELNMGLSIPAVGR
FRINLFRQRGDISMVVRYIKNKIPSIEQLNLPPILKSIVMELRGLVLVVGATGSGKSTTLAAMIDYRNQNQSGHILTIED
PIEFLHQHKKSIVDQREVGIDTMSYDNALVNAMREAPDVILIGEIRERNAMKHAIAYAETGHLCISTLHANNANQAMDRI
INFFPEDARKQVLLDLSLNLRAIISMRLIPGVNHQRMVAVEILLNTPYVSDLIEKGKIDEIKEVMERSTEQGMQTFDQAL
LELYKNGLISEENAIKYADSKNNVGLQIRLNSGKNFDSPEGDLTIESDEH
Nucleotide
Download Length: 1113 bp
>NTDB_id=1122608 EL220_RS02735 WP_027270761.1 613209..614321(+) (pilU) [Legionella sainthelensi strain NCTC11988]
ATGGACATAACACCTTTTTTTAAATTAATGGTGGATAAAAGTGCTTCAGACCTCTTTTTTAGTGTAGGCGCTCCACCGAA
TATTAAAATTGAGGGGGTTATTTTGCCCATTGGCCACGTTCCGCTTAAAGCCCAACAGATGGCTGAAATTGCTTTGTCTT
TGATGAATGATGATCAGCGTAAAGAATTCGAAGCCACAATGGAGCTGAATATGGGACTTTCGATTCCTGCAGTAGGGCGG
TTTAGGATTAATCTATTTCGTCAACGCGGTGATATCTCTATGGTGGTGCGCTATATTAAAAATAAAATTCCTTCTATAGA
GCAATTAAACTTACCACCTATTTTAAAGTCTATAGTCATGGAATTGCGTGGTTTAGTTTTAGTTGTTGGTGCGACTGGGT
CAGGGAAATCAACAACTCTCGCGGCAATGATTGATTATCGTAATCAGAATCAAAGTGGGCATATTTTAACAATCGAAGAT
CCTATAGAGTTTCTCCATCAGCACAAAAAATCCATAGTAGATCAGCGTGAAGTAGGCATAGATACGATGAGTTACGATAA
TGCATTAGTCAATGCAATGCGAGAGGCGCCAGATGTGATTTTAATCGGTGAAATTCGCGAGCGCAATGCAATGAAACATG
CAATCGCTTACGCAGAAACAGGCCATTTATGCATTTCCACTTTGCATGCGAATAATGCAAATCAAGCGATGGATCGGATC
ATTAATTTTTTTCCTGAAGATGCAAGAAAGCAAGTGCTTTTGGACTTATCACTGAATTTAAGAGCTATTATTTCCATGCG
TCTCATTCCTGGGGTAAACCATCAACGAATGGTGGCTGTAGAGATCCTATTAAATACGCCTTATGTTTCTGATTTAATTG
AGAAAGGAAAAATTGATGAGATTAAAGAGGTTATGGAACGGAGTACCGAGCAAGGAATGCAGACCTTTGATCAGGCTTTA
TTAGAGCTTTATAAAAATGGTTTGATTTCAGAGGAAAATGCTATTAAATATGCAGATTCCAAAAATAATGTGGGCTTACA
AATTCGTTTGAATAGTGGTAAAAATTTTGATTCGCCTGAGGGTGACTTGACTATAGAATCGGATGAGCATTGA
ATGGACATAACACCTTTTTTTAAATTAATGGTGGATAAAAGTGCTTCAGACCTCTTTTTTAGTGTAGGCGCTCCACCGAA
TATTAAAATTGAGGGGGTTATTTTGCCCATTGGCCACGTTCCGCTTAAAGCCCAACAGATGGCTGAAATTGCTTTGTCTT
TGATGAATGATGATCAGCGTAAAGAATTCGAAGCCACAATGGAGCTGAATATGGGACTTTCGATTCCTGCAGTAGGGCGG
TTTAGGATTAATCTATTTCGTCAACGCGGTGATATCTCTATGGTGGTGCGCTATATTAAAAATAAAATTCCTTCTATAGA
GCAATTAAACTTACCACCTATTTTAAAGTCTATAGTCATGGAATTGCGTGGTTTAGTTTTAGTTGTTGGTGCGACTGGGT
CAGGGAAATCAACAACTCTCGCGGCAATGATTGATTATCGTAATCAGAATCAAAGTGGGCATATTTTAACAATCGAAGAT
CCTATAGAGTTTCTCCATCAGCACAAAAAATCCATAGTAGATCAGCGTGAAGTAGGCATAGATACGATGAGTTACGATAA
TGCATTAGTCAATGCAATGCGAGAGGCGCCAGATGTGATTTTAATCGGTGAAATTCGCGAGCGCAATGCAATGAAACATG
CAATCGCTTACGCAGAAACAGGCCATTTATGCATTTCCACTTTGCATGCGAATAATGCAAATCAAGCGATGGATCGGATC
ATTAATTTTTTTCCTGAAGATGCAAGAAAGCAAGTGCTTTTGGACTTATCACTGAATTTAAGAGCTATTATTTCCATGCG
TCTCATTCCTGGGGTAAACCATCAACGAATGGTGGCTGTAGAGATCCTATTAAATACGCCTTATGTTTCTGATTTAATTG
AGAAAGGAAAAATTGATGAGATTAAAGAGGTTATGGAACGGAGTACCGAGCAAGGAATGCAGACCTTTGATCAGGCTTTA
TTAGAGCTTTATAAAAATGGTTTGATTTCAGAGGAAAATGCTATTAAATATGCAGATTCCAAAAATAATGTGGGCTTACA
AATTCGTTTGAATAGTGGTAAAAATTTTGATTCGCCTGAGGGTGACTTGACTATAGAATCGGATGAGCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
53.514 |
100 |
0.535 |
| pilU | Acinetobacter baylyi ADP1 |
52.661 |
96.486 |
0.508 |
| pilU | Vibrio cholerae strain A1552 |
48.189 |
97.027 |
0.468 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.248 |
91.622 |
0.405 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.982 |
92.432 |
0.397 |
| pilT | Legionella pneumophila strain Lp02 |
42.982 |
92.432 |
0.397 |
| pilT | Neisseria meningitidis 8013 |
41.787 |
93.784 |
0.392 |
| pilT | Neisseria gonorrhoeae MS11 |
41.787 |
93.784 |
0.392 |
| pilT | Pseudomonas aeruginosa PAK |
42.274 |
92.703 |
0.392 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.399 |
92.703 |
0.384 |
| pilT | Vibrio cholerae strain A1552 |
42.553 |
88.919 |
0.378 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.553 |
88.919 |
0.378 |
| pilT | Acinetobacter nosocomialis M2 |
41.617 |
90.27 |
0.376 |
| pilT | Acinetobacter baumannii D1279779 |
41.617 |
90.27 |
0.376 |
| pilT | Acinetobacter baumannii strain A118 |
41.617 |
90.27 |
0.376 |
| pilT | Acinetobacter baylyi ADP1 |
40.294 |
91.892 |
0.37 |