Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | AT689_RS03695 | Genome accession | NZ_LN831051 |
| Coordinates | 703146..703472 (+) | Length | 108 a.a. |
| NCBI ID | WP_000738633.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NCTC7465 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 698146..708472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT689_RS03670 (ERS445053_00718) | nagA | 698275..699426 (+) | 1152 | WP_001134457.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| AT689_RS03675 (ERS445053_00719) | - | 699589..700647 (+) | 1059 | WP_000649471.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| AT689_RS03680 (ERS445053_00720) | - | 700798..701163 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| AT689_RS03685 (ERS445053_00721) | comGA/cglA/cilD | 701239..702180 (+) | 942 | WP_000249571.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AT689_RS03690 (ERS445053_00722) | comGB/cglB | 702128..703144 (+) | 1017 | WP_001844679.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AT689_RS03695 (ERS445053_00723) | comGC/cglC | 703146..703472 (+) | 327 | WP_000738633.1 | comG operon protein ComGC | Machinery gene |
| AT689_RS03700 (ERS445053_00724) | comGD/cglD | 703465..703869 (+) | 405 | WP_000588020.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AT689_RS03705 (ERS445053_00725) | comGE/cglE | 703832..704134 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AT689_RS03710 (ERS445053_00726) | comGF/cglF | 704097..704558 (+) | 462 | WP_000250531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AT689_RS03715 (ERS445053_00727) | comGG/cglG | 704536..704949 (+) | 414 | WP_000265631.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AT689_RS12440 | - | 705086..705680 (+) | 595 | Protein_717 | class I SAM-dependent methyltransferase | - |
| AT689_RS03730 (ERS445053_00729) | comYH | 705741..706694 (+) | 954 | WP_000345130.1 | class I SAM-dependent methyltransferase | Machinery gene |
| AT689_RS03735 (ERS445053_00730) | - | 706745..707935 (+) | 1191 | WP_000167766.1 | acetate kinase | - |
| AT689_RS13375 | - | 707936..708067 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| AT689_RS03740 (ERS445053_00731) | rnpA | 708084..708455 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12222.42 Da Isoelectric Point: 10.0305
>NTDB_id=1114367 AT689_RS03695 WP_000738633.1 703146..703472(+) (comGC/cglC) [Streptococcus pneumoniae strain NCTC7465]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQVKAYKEYNDKNVGANRKVND
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQVKAYKEYNDKNVGANRKVND
Nucleotide
Download Length: 327 bp
>NTDB_id=1114367 AT689_RS03695 WP_000738633.1 703146..703472(+) (comGC/cglC) [Streptococcus pneumoniae strain NCTC7465]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGTTAAAGCTTATAAAGAATACAATGATAAAAATGTAGGAGCAAATCGTAAAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGTTAAAGCTTATAAAGAATACAATGATAAAAATGTAGGAGCAAATCGTAAAGTCAA
TGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
94.444 |
100 |
0.944 |
| comGC/cglC | Streptococcus pneumoniae D39 |
94.444 |
100 |
0.944 |
| comGC/cglC | Streptococcus pneumoniae R6 |
94.444 |
100 |
0.944 |
| comGC/cglC | Streptococcus mitis SK321 |
91.667 |
100 |
0.917 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
91.919 |
91.667 |
0.843 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
70.833 |
88.889 |
0.63 |
| comYC | Streptococcus mutans UA159 |
61.765 |
94.444 |
0.583 |
| comYC | Streptococcus mutans UA140 |
61.765 |
94.444 |
0.583 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
55.882 |
94.444 |
0.528 |
| comYC | Streptococcus suis isolate S10 |
66.667 |
75 |
0.5 |
| comGC | Staphylococcus aureus MW2 |
48.837 |
79.63 |
0.389 |
| comGC | Staphylococcus aureus N315 |
48.837 |
79.63 |
0.389 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
79.63 |
0.361 |