Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   AT689_RS03715 Genome accession   NZ_LN831051
Coordinates   704536..704949 (+) Length   137 a.a.
NCBI ID   WP_000265631.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain NCTC7465     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 699536..709949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT689_RS03675 (ERS445053_00719) - 699589..700647 (+) 1059 WP_000649471.1 zinc-dependent alcohol dehydrogenase family protein -
  AT689_RS03680 (ERS445053_00720) - 700798..701163 (+) 366 WP_000286415.1 DUF1033 family protein -
  AT689_RS03685 (ERS445053_00721) comGA/cglA/cilD 701239..702180 (+) 942 WP_000249571.1 competence type IV pilus ATPase ComGA Machinery gene
  AT689_RS03690 (ERS445053_00722) comGB/cglB 702128..703144 (+) 1017 WP_001844679.1 competence type IV pilus assembly protein ComGB Machinery gene
  AT689_RS03695 (ERS445053_00723) comGC/cglC 703146..703472 (+) 327 WP_000738633.1 comG operon protein ComGC Machinery gene
  AT689_RS03700 (ERS445053_00724) comGD/cglD 703465..703869 (+) 405 WP_000588020.1 competence type IV pilus minor pilin ComGD Machinery gene
  AT689_RS03705 (ERS445053_00725) comGE/cglE 703832..704134 (+) 303 WP_000413382.1 competence type IV pilus minor pilin ComGE Machinery gene
  AT689_RS03710 (ERS445053_00726) comGF/cglF 704097..704558 (+) 462 WP_000250531.1 competence type IV pilus minor pilin ComGF Machinery gene
  AT689_RS03715 (ERS445053_00727) comGG/cglG 704536..704949 (+) 414 WP_000265631.1 competence type IV pilus minor pilin ComGG Machinery gene
  AT689_RS12440 - 705086..705680 (+) 595 Protein_717 class I SAM-dependent methyltransferase -
  AT689_RS03730 (ERS445053_00729) comYH 705741..706694 (+) 954 WP_000345130.1 class I SAM-dependent methyltransferase Machinery gene
  AT689_RS03735 (ERS445053_00730) - 706745..707935 (+) 1191 WP_000167766.1 acetate kinase -
  AT689_RS13375 - 707936..708067 (+) 132 WP_000768904.1 hypothetical protein -
  AT689_RS03740 (ERS445053_00731) rnpA 708084..708455 (+) 372 WP_000739246.1 ribonuclease P protein component -
  AT689_RS03745 (ERS445053_00732) - 708430..709254 (+) 825 WP_000727904.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15892.33 Da        Isoelectric Point: 10.2476

>NTDB_id=1114371 AT689_RS03715 WP_000265631.1 704536..704949(+) (comGG/cglG) [Streptococcus pneumoniae strain NCTC7465]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TSLVTTVRTSKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=1114371 AT689_RS03715 WP_000265631.1 704536..704949(+) (comGG/cglG) [Streptococcus pneumoniae strain NCTC7465]
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGTCTAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

86.131

100

0.861

  comGG/cglG Streptococcus pneumoniae Rx1

94.872

85.401

0.81

  comGG/cglG Streptococcus pneumoniae D39

94.872

85.401

0.81

  comGG/cglG Streptococcus pneumoniae R6

94.872

85.401

0.81

  comGG/cglG Streptococcus pneumoniae TIGR4

94.872

85.401

0.81

  comGG/cglG Streptococcus mitis NCTC 12261

90.909

88.321

0.803

  comYG Streptococcus mutans UA140

39.552

97.81

0.387

  comYG Streptococcus mutans UA159

39.552

97.81

0.387


Multiple sequence alignment