Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LMI_RS10740 | Genome accession | NZ_LN614830 |
| Coordinates | 2417481..2418494 (-) | Length | 337 a.a. |
| NCBI ID | WP_045099799.1 | Uniprot ID | A0A098GGG8 |
| Organism | Legionella micdadei strain ATCC 33218 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2412481..2423494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMI_RS10725 (LMI_2312) | - | 2414247..2415302 (+) | 1056 | WP_045099796.1 | hypothetical protein | - |
| LMI_RS10730 (LMI_2313) | - | 2415340..2415990 (-) | 651 | WP_045099797.1 | CatB-related O-acetyltransferase | - |
| LMI_RS10735 (LMI_2315) | - | 2416153..2417445 (+) | 1293 | WP_045099798.1 | MFS transporter | - |
| LMI_RS10740 (LMI_2316) | pilT | 2417481..2418494 (-) | 1014 | WP_045099799.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LMI_RS10745 (LMI_2317) | - | 2418542..2418904 (-) | 363 | WP_052679542.1 | hypothetical protein | - |
| LMI_RS10750 (LMI_2318) | - | 2419023..2420108 (+) | 1086 | WP_045099800.1 | hypothetical protein | - |
| LMI_RS10755 (LMI_2319) | - | 2420117..2422228 (-) | 2112 | WP_082050736.1 | FUSC family protein | - |
| LMI_RS10760 (LMI_2320) | - | 2422221..2423216 (-) | 996 | WP_045099802.1 | efflux RND transporter periplasmic adaptor subunit | - |
Sequence
Protein
Download Length: 337 a.a. Molecular weight: 37728.65 Da Isoelectric Point: 7.2721
>NTDB_id=1113652 LMI_RS10740 WP_045099799.1 2417481..2418494(-) (pilT) [Legionella micdadei strain ATCC 33218]
MDFNGLLECAINNNASDLHLSAGLPPVIRVDGDLKKLNWPVLDQEYMSNFVQGMMNEAQRAIFKRQLQIDFAIQFNDHYR
LRSNIFVQARGISAVFRIIPTSIKTLEELGFPAVSKKIVSCPNGLVLITGASGSGKSTTLAAFIHYMNSHFYQHIITLED
PIEFIYESNKCLIHQREIHRDALHFSAALRSALREDPDIILLGELRDPETIRLAITAAETGHLVFATLHTNSSAKALNRI
IDVFPGDEKTVIRTMLSESLQAVITQALLKKTGGGRIAAFEIMLCTPAIRNLIRENKIAQIYSVIQTGQNMGMQTLEQHV
RKLVSSQLVPTEIELFY
MDFNGLLECAINNNASDLHLSAGLPPVIRVDGDLKKLNWPVLDQEYMSNFVQGMMNEAQRAIFKRQLQIDFAIQFNDHYR
LRSNIFVQARGISAVFRIIPTSIKTLEELGFPAVSKKIVSCPNGLVLITGASGSGKSTTLAAFIHYMNSHFYQHIITLED
PIEFIYESNKCLIHQREIHRDALHFSAALRSALREDPDIILLGELRDPETIRLAITAAETGHLVFATLHTNSSAKALNRI
IDVFPGDEKTVIRTMLSESLQAVITQALLKKTGGGRIAAFEIMLCTPAIRNLIRENKIAQIYSVIQTGQNMGMQTLEQHV
RKLVSSQLVPTEIELFY
Nucleotide
Download Length: 1014 bp
>NTDB_id=1113652 LMI_RS10740 WP_045099799.1 2417481..2418494(-) (pilT) [Legionella micdadei strain ATCC 33218]
ATGGACTTCAATGGATTGCTTGAGTGTGCAATAAATAATAATGCCTCGGATTTGCATTTGTCTGCGGGTTTACCCCCTGT
GATTCGTGTCGATGGTGATCTAAAAAAACTCAATTGGCCTGTCTTAGATCAAGAATACATGAGCAATTTTGTTCAAGGTA
TGATGAACGAGGCACAACGGGCTATTTTCAAGAGGCAGCTCCAAATCGATTTCGCAATCCAATTTAATGATCACTACCGA
TTAAGAAGCAATATTTTTGTTCAAGCCCGAGGCATCAGTGCGGTTTTTCGTATTATTCCAACAAGCATTAAGACGCTTGA
AGAATTGGGTTTTCCTGCTGTTTCCAAGAAAATTGTGTCTTGTCCTAACGGATTAGTTTTAATTACTGGCGCTTCGGGCT
CTGGTAAAAGCACCACTCTTGCCGCCTTTATTCACTATATGAATTCACATTTTTATCAACACATTATTACCTTGGAGGAT
CCGATCGAATTTATCTATGAAAGTAACAAATGCCTGATTCATCAACGTGAAATTCACCGCGATGCCCTTCATTTTTCTGC
AGCGCTGCGTTCGGCTTTGCGGGAAGACCCTGATATTATTTTGCTTGGAGAGTTGCGCGATCCTGAAACAATTCGTCTTG
CGATTACTGCTGCTGAAACAGGACATCTTGTTTTTGCGACACTGCATACGAATTCGTCGGCGAAAGCCCTTAATAGAATT
ATCGACGTCTTTCCTGGTGATGAGAAAACAGTAATAAGAACCATGTTATCTGAATCATTACAAGCAGTGATTACTCAGGC
GTTGTTGAAAAAAACAGGCGGTGGACGTATTGCTGCCTTTGAGATAATGCTGTGTACACCTGCAATTCGCAACTTAATTC
GTGAAAATAAAATTGCACAAATCTATTCTGTCATCCAAACTGGTCAAAACATGGGGATGCAGACTTTAGAGCAGCACGTA
AGGAAGTTGGTTTCAAGTCAGTTAGTGCCCACAGAAATTGAACTGTTTTATTGA
ATGGACTTCAATGGATTGCTTGAGTGTGCAATAAATAATAATGCCTCGGATTTGCATTTGTCTGCGGGTTTACCCCCTGT
GATTCGTGTCGATGGTGATCTAAAAAAACTCAATTGGCCTGTCTTAGATCAAGAATACATGAGCAATTTTGTTCAAGGTA
TGATGAACGAGGCACAACGGGCTATTTTCAAGAGGCAGCTCCAAATCGATTTCGCAATCCAATTTAATGATCACTACCGA
TTAAGAAGCAATATTTTTGTTCAAGCCCGAGGCATCAGTGCGGTTTTTCGTATTATTCCAACAAGCATTAAGACGCTTGA
AGAATTGGGTTTTCCTGCTGTTTCCAAGAAAATTGTGTCTTGTCCTAACGGATTAGTTTTAATTACTGGCGCTTCGGGCT
CTGGTAAAAGCACCACTCTTGCCGCCTTTATTCACTATATGAATTCACATTTTTATCAACACATTATTACCTTGGAGGAT
CCGATCGAATTTATCTATGAAAGTAACAAATGCCTGATTCATCAACGTGAAATTCACCGCGATGCCCTTCATTTTTCTGC
AGCGCTGCGTTCGGCTTTGCGGGAAGACCCTGATATTATTTTGCTTGGAGAGTTGCGCGATCCTGAAACAATTCGTCTTG
CGATTACTGCTGCTGAAACAGGACATCTTGTTTTTGCGACACTGCATACGAATTCGTCGGCGAAAGCCCTTAATAGAATT
ATCGACGTCTTTCCTGGTGATGAGAAAACAGTAATAAGAACCATGTTATCTGAATCATTACAAGCAGTGATTACTCAGGC
GTTGTTGAAAAAAACAGGCGGTGGACGTATTGCTGCCTTTGAGATAATGCTGTGTACACCTGCAATTCGCAACTTAATTC
GTGAAAATAAAATTGCACAAATCTATTCTGTCATCCAAACTGGTCAAAACATGGGGATGCAGACTTTAGAGCAGCACGTA
AGGAAGTTGGTTTCAAGTCAGTTAGTGCCCACAGAAATTGAACTGTTTTATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Vibrio cholerae strain A1552 |
58.529 |
100 |
0.591 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
58.529 |
100 |
0.591 |
| pilT | Legionella pneumophila strain Lp02 |
60.182 |
97.626 |
0.588 |
| pilT | Legionella pneumophila strain ERS1305867 |
60.182 |
97.626 |
0.588 |
| pilT | Acinetobacter baylyi ADP1 |
59.271 |
97.626 |
0.579 |
| pilT | Pseudomonas aeruginosa PAK |
58.735 |
98.516 |
0.579 |
| pilT | Pseudomonas stutzeri DSM 10701 |
58.967 |
97.626 |
0.576 |
| pilT | Acinetobacter nosocomialis M2 |
58.663 |
97.626 |
0.573 |
| pilT | Acinetobacter baumannii D1279779 |
58.359 |
97.626 |
0.57 |
| pilT | Acinetobacter baumannii strain A118 |
58.359 |
97.626 |
0.57 |
| pilT | Neisseria meningitidis 8013 |
54.79 |
99.11 |
0.543 |
| pilT | Neisseria gonorrhoeae MS11 |
54.655 |
98.813 |
0.54 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.455 |
97.923 |
0.445 |
| pilU | Vibrio cholerae strain A1552 |
40.615 |
96.439 |
0.392 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.123 |
96.142 |
0.386 |
| pilU | Acinetobacter baylyi ADP1 |
37.994 |
97.626 |
0.371 |