Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | LFA_RS10545 | Genome accession | NZ_LN614827 |
| Coordinates | 2588398..2589519 (-) | Length | 373 a.a. |
| NCBI ID | WP_045096155.1 | Uniprot ID | A0A098G6U4 |
| Organism | Legionella fallonii LLAP-10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2583398..2594519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFA_RS10530 (LFA_2331) | - | 2584159..2585454 (+) | 1296 | WP_045096154.1 | serine/threonine transporter | - |
| LFA_RS10540 (LFA_2332) | ankK | 2585587..2588322 (-) | 2736 | WP_331709343.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| LFA_RS10545 (LFA_2333) | pilU | 2588398..2589519 (-) | 1122 | WP_045096155.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LFA_RS10550 (LFA_2334) | - | 2589675..2590475 (-) | 801 | WP_045096156.1 | phytanoyl-CoA dioxygenase family protein | - |
| LFA_RS10555 (LFA_2335) | radA | 2590496..2591848 (-) | 1353 | WP_045096157.1 | DNA repair protein RadA | - |
| LFA_RS10560 (LFA_2336) | - | 2592018..2593136 (+) | 1119 | WP_045096158.1 | hypothetical protein | - |
| LFA_RS10565 (LFA_2337) | - | 2593404..2594330 (+) | 927 | WP_045096159.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41790.07 Da Isoelectric Point: 5.3059
>NTDB_id=1113626 LFA_RS10545 WP_045096155.1 2588398..2589519(-) (pilU) [Legionella fallonii LLAP-10]
MDITPFFKLMVEKGASDLFFSVGAPPNIKIEGITSPIGQAPIKSQQMSEIALSIMSDEQQKEFDANMELNMAFTVNAVGR
FRVNLFKQRGEIAMVVRYIKGEIPSIEELGLPLVLKTIMMELRGLILVVGATGSGKSTTLASMINYRNENHRGHILTIED
PIEYLHQHKKSIVDQREVGIDTLNYENALKNAMREAPDVILIGEIRDRNAMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPEDAKQQLLMDLSLNLRAIISLRLIPGIANHRVSAVEILLNSPYISDLIDKGKVDEIKEVMARSNEQGMQTFDQAL
LALYKEGKITKENAIKYADSKNNVGLQIRLNEEHDFDGEQEHLTIQPDDIDKI
MDITPFFKLMVEKGASDLFFSVGAPPNIKIEGITSPIGQAPIKSQQMSEIALSIMSDEQQKEFDANMELNMAFTVNAVGR
FRVNLFKQRGEIAMVVRYIKGEIPSIEELGLPLVLKTIMMELRGLILVVGATGSGKSTTLASMINYRNENHRGHILTIED
PIEYLHQHKKSIVDQREVGIDTLNYENALKNAMREAPDVILIGEIRDRNAMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPEDAKQQLLMDLSLNLRAIISLRLIPGIANHRVSAVEILLNSPYISDLIDKGKVDEIKEVMARSNEQGMQTFDQAL
LALYKEGKITKENAIKYADSKNNVGLQIRLNEEHDFDGEQEHLTIQPDDIDKI
Nucleotide
Download Length: 1122 bp
>NTDB_id=1113626 LFA_RS10545 WP_045096155.1 2588398..2589519(-) (pilU) [Legionella fallonii LLAP-10]
ATGGACATCACTCCATTTTTTAAATTGATGGTTGAGAAAGGGGCTTCTGATTTATTTTTTAGTGTAGGTGCTCCTCCTAA
TATTAAAATTGAAGGAATTACCTCACCCATAGGGCAAGCCCCTATTAAATCTCAGCAAATGTCTGAGATTGCTCTGTCCA
TCATGAGTGATGAGCAGCAAAAAGAATTTGATGCCAATATGGAACTGAATATGGCATTTACGGTGAATGCAGTAGGACGT
TTTAGAGTTAACCTGTTTAAACAACGTGGCGAAATAGCTATGGTGGTTCGCTACATTAAAGGTGAAATTCCATCTATAGA
AGAACTTGGCTTACCTCTAGTTTTGAAAACTATTATGATGGAATTAAGAGGTCTGATTTTGGTTGTTGGTGCTACTGGCT
CAGGTAAGTCAACAACATTAGCGTCTATGATTAATTATCGTAATGAGAATCACAGAGGCCATATTTTAACCATTGAAGAT
CCTATAGAATATTTACATCAGCATAAAAAATCTATTGTTGATCAACGCGAAGTCGGTATAGATACCTTAAATTATGAAAA
TGCACTAAAAAATGCTATGCGCGAGGCGCCTGATGTCATTTTAATTGGAGAAATTCGCGATCGTAATGCGATGAAACATG
CCATAGCTTATGCAGAGACAGGGCACTTGTGTATTTCTACCCTACATGCGAATAATGCCAATCAGGCTTTAGATCGAGTT
ATTAATTTTTTCCCCGAAGATGCAAAACAGCAATTATTAATGGACCTGTCTTTAAATTTACGCGCTATTATTTCATTACG
ATTAATACCTGGAATAGCAAACCATCGCGTCTCTGCTGTTGAGATATTATTAAATTCACCTTATATCTCCGATTTGATTG
ATAAAGGTAAGGTCGATGAAATTAAAGAGGTGATGGCGCGAAGTAATGAACAAGGGATGCAAACTTTTGATCAAGCTCTT
TTAGCTTTGTATAAAGAAGGCAAAATAACGAAAGAAAATGCAATTAAGTATGCTGATTCAAAAAATAATGTGGGATTACA
GATTCGTCTTAATGAAGAACATGATTTTGATGGTGAACAGGAGCACTTAACTATTCAACCTGATGATATAGATAAGATTT
GA
ATGGACATCACTCCATTTTTTAAATTGATGGTTGAGAAAGGGGCTTCTGATTTATTTTTTAGTGTAGGTGCTCCTCCTAA
TATTAAAATTGAAGGAATTACCTCACCCATAGGGCAAGCCCCTATTAAATCTCAGCAAATGTCTGAGATTGCTCTGTCCA
TCATGAGTGATGAGCAGCAAAAAGAATTTGATGCCAATATGGAACTGAATATGGCATTTACGGTGAATGCAGTAGGACGT
TTTAGAGTTAACCTGTTTAAACAACGTGGCGAAATAGCTATGGTGGTTCGCTACATTAAAGGTGAAATTCCATCTATAGA
AGAACTTGGCTTACCTCTAGTTTTGAAAACTATTATGATGGAATTAAGAGGTCTGATTTTGGTTGTTGGTGCTACTGGCT
CAGGTAAGTCAACAACATTAGCGTCTATGATTAATTATCGTAATGAGAATCACAGAGGCCATATTTTAACCATTGAAGAT
CCTATAGAATATTTACATCAGCATAAAAAATCTATTGTTGATCAACGCGAAGTCGGTATAGATACCTTAAATTATGAAAA
TGCACTAAAAAATGCTATGCGCGAGGCGCCTGATGTCATTTTAATTGGAGAAATTCGCGATCGTAATGCGATGAAACATG
CCATAGCTTATGCAGAGACAGGGCACTTGTGTATTTCTACCCTACATGCGAATAATGCCAATCAGGCTTTAGATCGAGTT
ATTAATTTTTTCCCCGAAGATGCAAAACAGCAATTATTAATGGACCTGTCTTTAAATTTACGCGCTATTATTTCATTACG
ATTAATACCTGGAATAGCAAACCATCGCGTCTCTGCTGTTGAGATATTATTAAATTCACCTTATATCTCCGATTTGATTG
ATAAAGGTAAGGTCGATGAAATTAAAGAGGTGATGGCGCGAAGTAATGAACAAGGGATGCAAACTTTTGATCAAGCTCTT
TTAGCTTTGTATAAAGAAGGCAAAATAACGAAAGAAAATGCAATTAAGTATGCTGATTCAAAAAATAATGTGGGATTACA
GATTCGTCTTAATGAAGAACATGATTTTGATGGTGAACAGGAGCACTTAACTATTCAACCTGATGATATAGATAAGATTT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
53.699 |
97.855 |
0.525 |
| pilU | Acinetobacter baylyi ADP1 |
51.549 |
95.174 |
0.491 |
| pilU | Vibrio cholerae strain A1552 |
48.747 |
96.247 |
0.469 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.363 |
90.885 |
0.394 |
| pilT | Pseudomonas aeruginosa PAK |
42.857 |
91.957 |
0.394 |
| pilT | Neisseria gonorrhoeae MS11 |
40.922 |
93.029 |
0.381 |
| pilT | Neisseria meningitidis 8013 |
40.922 |
93.029 |
0.381 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.399 |
91.957 |
0.381 |
| pilT | Legionella pneumophila strain Lp02 |
41.228 |
91.689 |
0.378 |
| pilT | Legionella pneumophila strain ERS1305867 |
41.228 |
91.689 |
0.378 |
| pilT | Acinetobacter baumannii strain A118 |
41.617 |
89.544 |
0.373 |
| pilT | Acinetobacter nosocomialis M2 |
41.617 |
89.544 |
0.373 |
| pilT | Acinetobacter baumannii D1279779 |
41.617 |
89.544 |
0.373 |
| pilT | Acinetobacter baylyi ADP1 |
40.588 |
91.153 |
0.37 |
| pilT | Vibrio cholerae strain A1552 |
41.033 |
88.204 |
0.362 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.033 |
88.204 |
0.362 |