Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACKTT9_RS15765 | Genome accession | NZ_AP038372 |
| Coordinates | 3550002..3551054 (+) | Length | 350 a.a. |
| NCBI ID | WP_407872294.1 | Uniprot ID | - |
| Organism | Paenibacillus sp. P36 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3545002..3556054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKTT9_RS15760 (PAENIP36_30730) | - | 3548317..3549981 (+) | 1665 | WP_127451699.1 | GspE/PulE family protein | - |
| ACKTT9_RS15765 (PAENIP36_30740) | pilT | 3550002..3551054 (+) | 1053 | WP_407872294.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACKTT9_RS15770 (PAENIP36_30750) | - | 3551054..3552262 (+) | 1209 | WP_407872295.1 | type II secretion system F family protein | - |
| ACKTT9_RS15775 (PAENIP36_30760) | - | 3552286..3552759 (+) | 474 | WP_407872296.1 | type II secretion system protein | - |
| ACKTT9_RS15780 | - | 3552830..3553048 (+) | 219 | Protein_3042 | prepilin peptidase | - |
| ACKTT9_RS15785 | - | 3553082..3553588 (+) | 507 | WP_407873049.1 | prepilin peptidase | - |
| ACKTT9_RS15790 (PAENIP36_30780) | pilM | 3553604..3555217 (+) | 1614 | WP_407872297.1 | pilus assembly protein PilM | - |
| ACKTT9_RS15795 (PAENIP36_30790) | pilO | 3555201..3555806 (+) | 606 | WP_407872298.1 | type 4a pilus biogenesis protein PilO | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38110.49 Da Isoelectric Point: 6.7791
>NTDB_id=111025 ACKTT9_RS15765 WP_407872294.1 3550002..3551054(+) (pilT) [Paenibacillus sp. P36]
MSNSLERIVNLLRTAHESKASDLHLSVGSPPIIRVHGTLQQVGNETLHADDTRSMAEALLNADQIDRFDQAGELDFSYEL
EGCSRYRINAYRQRGRVSVAIRTIPTKIPSLEQLQLPSVISSLALKPQGLVLVTGPTGSGKSSTLAAMIDYINRTEKKHI
VTLEDPIEFLHTHSSSIIDQREVGSDTKSFSNGLRAALRQDPDVILVGEMRDLETISAAVTAAETGHLVFATLHTTDAPQ
TIDRIIDAFPAHQQGQIRVQLAAVLVGVISQRLFPKSGGQGRTCATEIMINTPAVGNLIRSEKIHQIKSVMQTGRSLGMH
TLDMSIKEQMQQGLIDPIAARAYLAEGGVM
MSNSLERIVNLLRTAHESKASDLHLSVGSPPIIRVHGTLQQVGNETLHADDTRSMAEALLNADQIDRFDQAGELDFSYEL
EGCSRYRINAYRQRGRVSVAIRTIPTKIPSLEQLQLPSVISSLALKPQGLVLVTGPTGSGKSSTLAAMIDYINRTEKKHI
VTLEDPIEFLHTHSSSIIDQREVGSDTKSFSNGLRAALRQDPDVILVGEMRDLETISAAVTAAETGHLVFATLHTTDAPQ
TIDRIIDAFPAHQQGQIRVQLAAVLVGVISQRLFPKSGGQGRTCATEIMINTPAVGNLIRSEKIHQIKSVMQTGRSLGMH
TLDMSIKEQMQQGLIDPIAARAYLAEGGVM
Nucleotide
Download Length: 1053 bp
>NTDB_id=111025 ACKTT9_RS15765 WP_407872294.1 3550002..3551054(+) (pilT) [Paenibacillus sp. P36]
ATGTCAAATTCGTTAGAGCGGATCGTAAATTTATTGAGGACTGCCCATGAGTCTAAGGCATCTGACTTGCATCTCTCTGT
AGGTTCGCCGCCAATCATACGCGTTCACGGCACATTACAGCAAGTTGGGAATGAAACGCTGCATGCTGATGATACTCGTT
CCATGGCAGAGGCTCTTTTGAATGCTGACCAGATAGATCGATTTGATCAAGCTGGAGAGCTGGATTTTTCGTATGAGCTT
GAAGGATGTTCACGGTACAGGATTAATGCCTATCGTCAAAGAGGTCGCGTCAGCGTCGCAATTCGAACGATTCCAACAAA
GATTCCGTCTCTGGAACAGCTCCAGCTGCCTAGTGTGATTAGTTCATTAGCGTTGAAACCACAAGGACTTGTCTTAGTGA
CAGGACCAACGGGAAGTGGCAAATCTTCCACATTGGCAGCTATGATCGATTACATTAATCGAACCGAGAAGAAGCATATT
GTAACGTTGGAAGACCCGATCGAGTTTCTTCATACGCATTCTTCATCGATTATTGACCAAAGAGAAGTAGGCAGTGATAC
GAAGTCTTTTTCAAATGGCTTAAGAGCGGCTTTGCGCCAGGACCCCGATGTTATTCTTGTTGGCGAGATGCGTGATCTTG
AAACGATCTCGGCAGCCGTTACGGCAGCTGAAACGGGACATTTGGTCTTTGCAACCTTACATACAACAGACGCACCACAA
ACGATTGATCGCATCATCGATGCTTTCCCGGCGCATCAGCAAGGGCAGATTCGTGTGCAGCTGGCAGCAGTTTTGGTCGG
AGTCATCTCACAGCGGTTGTTTCCCAAGTCTGGTGGCCAAGGACGAACATGCGCTACGGAAATCATGATCAATACACCGG
CAGTAGGCAATCTTATTCGTTCGGAGAAAATTCATCAGATCAAGAGTGTCATGCAAACTGGGCGCAGCTTAGGCATGCAT
ACGCTAGACATGTCGATAAAGGAACAAATGCAGCAAGGACTTATTGATCCCATCGCAGCGAGAGCTTATCTTGCTGAGGG
TGGTGTGATGTAA
ATGTCAAATTCGTTAGAGCGGATCGTAAATTTATTGAGGACTGCCCATGAGTCTAAGGCATCTGACTTGCATCTCTCTGT
AGGTTCGCCGCCAATCATACGCGTTCACGGCACATTACAGCAAGTTGGGAATGAAACGCTGCATGCTGATGATACTCGTT
CCATGGCAGAGGCTCTTTTGAATGCTGACCAGATAGATCGATTTGATCAAGCTGGAGAGCTGGATTTTTCGTATGAGCTT
GAAGGATGTTCACGGTACAGGATTAATGCCTATCGTCAAAGAGGTCGCGTCAGCGTCGCAATTCGAACGATTCCAACAAA
GATTCCGTCTCTGGAACAGCTCCAGCTGCCTAGTGTGATTAGTTCATTAGCGTTGAAACCACAAGGACTTGTCTTAGTGA
CAGGACCAACGGGAAGTGGCAAATCTTCCACATTGGCAGCTATGATCGATTACATTAATCGAACCGAGAAGAAGCATATT
GTAACGTTGGAAGACCCGATCGAGTTTCTTCATACGCATTCTTCATCGATTATTGACCAAAGAGAAGTAGGCAGTGATAC
GAAGTCTTTTTCAAATGGCTTAAGAGCGGCTTTGCGCCAGGACCCCGATGTTATTCTTGTTGGCGAGATGCGTGATCTTG
AAACGATCTCGGCAGCCGTTACGGCAGCTGAAACGGGACATTTGGTCTTTGCAACCTTACATACAACAGACGCACCACAA
ACGATTGATCGCATCATCGATGCTTTCCCGGCGCATCAGCAAGGGCAGATTCGTGTGCAGCTGGCAGCAGTTTTGGTCGG
AGTCATCTCACAGCGGTTGTTTCCCAAGTCTGGTGGCCAAGGACGAACATGCGCTACGGAAATCATGATCAATACACCGG
CAGTAGGCAATCTTATTCGTTCGGAGAAAATTCATCAGATCAAGAGTGTCATGCAAACTGGGCGCAGCTTAGGCATGCAT
ACGCTAGACATGTCGATAAAGGAACAAATGCAGCAAGGACTTATTGATCCCATCGCAGCGAGAGCTTATCTTGCTGAGGG
TGGTGTGATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.878 |
93.714 |
0.514 |
| pilT | Neisseria meningitidis 8013 |
52.679 |
96 |
0.506 |
| pilT | Neisseria gonorrhoeae MS11 |
52.679 |
96 |
0.506 |
| pilT | Pseudomonas aeruginosa PAK |
51.497 |
95.429 |
0.491 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.599 |
95.429 |
0.483 |
| pilT | Acinetobacter baumannii D1279779 |
50.299 |
95.429 |
0.48 |
| pilT | Acinetobacter nosocomialis M2 |
50.299 |
95.429 |
0.48 |
| pilT | Acinetobacter baumannii strain A118 |
50.299 |
95.429 |
0.48 |
| pilT | Acinetobacter baylyi ADP1 |
49.851 |
95.714 |
0.477 |
| pilT | Vibrio cholerae strain A1552 |
50.152 |
94 |
0.471 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.152 |
94 |
0.471 |
| pilT | Legionella pneumophila strain ERS1305867 |
49.085 |
93.714 |
0.46 |
| pilT | Legionella pneumophila strain Lp02 |
49.085 |
93.714 |
0.46 |
| pilU | Pseudomonas stutzeri DSM 10701 |
43.077 |
92.857 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
42.453 |
90.857 |
0.386 |
| pilU | Vibrio cholerae strain A1552 |
42.857 |
88 |
0.377 |