Detailed information NTG1106999

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: ACLKM3_RS01265
• Genome accession: NZ_CP183897
• Coordinates: 283905..284342 (-)
• Length: 145 a.a.
• NCBI ID: WP_019836160.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain M10_NDM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	274203..283886	283905..284342	flank	19

Gene organization within MGE regions

Location: 274203..284342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM3_RS01230	-	274203..275225 (+)	1023	WP_411690782.1	glycosyltransferase family 4 protein	-
ACLKM3_RS01235	-	275230..276477 (-)	1248	WP_019836154.1	CDP-glycerol glycerophosphotransferase family protein	-
ACLKM3_RS01240	ispD	276464..277810 (-)	1347	WP_019836155.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ACLKM3_RS01245	-	277803..279326 (-)	1524	WP_019836156.1	hypothetical protein	-
ACLKM3_RS01250	-	279339..281054 (-)	1716	WP_026437996.1	ABC transporter ATP-binding protein	-
ACLKM3_RS01255	-	281063..281914 (-)	852	WP_019836158.1	glycosyltransferase family 2 protein	-
ACLKM3_RS01260	-	281922..283841 (-)	1920	WP_019836159.1	hypothetical protein	-
ACLKM3_RS01265	pilE	283905..284342 (-)	438	WP_019836160.1	pilin	Machinery gene

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 14662.84 Da
• Isoelectric Point: 8.9878

>NTDB_id=1106999 ACLKM3_RS01265 WP_019836160.1 283905..284342(-) (pilE) [Acinetobacter towneri strain M10_NDM]
MNTMQKGFTLIELMIVVAIIGILAAIAIPAYQDYTARSQMTEAMTLASGAKGSVTEVYSNTGAFPTTNAGAGLAANTAIN
GKYVNDVAVGAGGIIVATMRSSGVASGIAGATLTLSPTTTAGAVQWTCKKASTVDAKYYPSACRN

Nucleotide

• Length: 438 bp

>NTDB_id=1106999 ACLKM3_RS01265 WP_019836160.1 283905..284342(-) (pilE) [Acinetobacter towneri strain M10_NDM]
ATGAATACAATGCAGAAGGGCTTCACGCTCATCGAACTTATGATTGTTGTCGCTATTATCGGTATTTTGGCGGCGATTGC
GATTCCTGCTTATCAGGACTATACCGCTCGTTCGCAAATGACTGAAGCAATGACTCTAGCGAGTGGGGCAAAAGGTTCTG
TGACAGAAGTATATTCAAATACTGGGGCATTCCCTACAACAAATGCAGGTGCTGGTCTTGCAGCTAATACTGCAATTAAT
GGTAAATATGTGAATGATGTTGCAGTTGGTGCAGGTGGTATCATCGTTGCAACGATGAGAAGTTCAGGAGTGGCATCAGG
TATTGCAGGTGCAACACTTACTTTAAGTCCTACTACAACTGCTGGTGCAGTACAATGGACTTGTAAAAAAGCTAGTACTG
TTGATGCTAAATATTATCCGTCTGCATGTCGCAACTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-27)

• Pilin (bacterial filament) (Pilin) (36-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	50.311	100	0.559
pilE	Neisseria gonorrhoeae strain FA1090	48.75	100	0.538
comP	Acinetobacter baylyi ADP1	49.007	100	0.51
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	38.298	100	0.497
pilA2	Legionella pneumophila strain ERS1305867	50.355	97.241	0.49
pilA2	Legionella pneumophila str. Paris	50.355	97.241	0.49
pilA/pilAI	Pseudomonas stutzeri DSM 10701	47.26	100	0.476
pilA	Ralstonia pseudosolanacearum GMI1000	41.212	100	0.469
pilA/pilA1	Eikenella corrodens VA1	40.252	100	0.441
pilA	Pseudomonas aeruginosa PAK	41.333	100	0.428
pilA	Acinetobacter baumannii strain A118	41.497	100	0.421
pilA	Vibrio cholerae C6706	38.065	100	0.407
pilA	Vibrio cholerae strain A1552	38.065	100	0.407
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	38.065	100	0.407
pilA	Acinetobacter nosocomialis M2	43.75	88.276	0.386
pilA/pilAII	Pseudomonas stutzeri DSM 10701	39.716	97.241	0.386