Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACLKM5_RS10895 | Genome accession | NZ_CP183893 |
| Coordinates | 2277407..2278444 (+) | Length | 345 a.a. |
| NCBI ID | WP_005179768.1 | Uniprot ID | N9MH18 |
| Organism | Acinetobacter indicus strain D10_NDM_tet(X3) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2272407..2283444
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKM5_RS10885 | - | 2275454..2276551 (+) | 1098 | WP_180006899.1 | acyltransferase family protein | - |
| ACLKM5_RS10890 | - | 2276597..2277283 (-) | 687 | WP_286409321.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACLKM5_RS10895 | pilT | 2277407..2278444 (+) | 1038 | WP_005179768.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACLKM5_RS10900 | pilU | 2278472..2279590 (+) | 1119 | WP_005179770.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACLKM5_RS10905 | fur | 2279663..2280100 (-) | 438 | WP_005179771.1 | ferric iron uptake transcriptional regulator | - |
| ACLKM5_RS10910 | - | 2280213..2280611 (+) | 399 | WP_005179773.1 | outer membrane protein assembly factor BamE | - |
| ACLKM5_RS10915 | - | 2280654..2280977 (-) | 324 | WP_005179774.1 | RnfH family protein | - |
| ACLKM5_RS10920 | - | 2280977..2282059 (-) | 1083 | WP_127800517.1 | hypothetical protein | - |
| ACLKM5_RS10925 | - | 2282226..2282681 (-) | 456 | WP_168399274.1 | bacteriohemerythrin | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38237.74 Da Isoelectric Point: 6.5051
>NTDB_id=1106938 ACLKM5_RS10895 WP_005179768.1 2277407..2278444(+) (pilT) [Acinetobacter indicus strain D10_NDM_tet(X3)]
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEDNLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTIEDLGMGQIFRDICDYPRGLVLVTGPTGSGKSTTLAAMIDYINDNRYDHILTVED
PIEFVHQSKKCLVNQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMSTLDQSL
KALVSRGVISPQTARTVAKQPESFL
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEDNLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTIEDLGMGQIFRDICDYPRGLVLVTGPTGSGKSTTLAAMIDYINDNRYDHILTVED
PIEFVHQSKKCLVNQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMSTLDQSL
KALVSRGVISPQTARTVAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=1106938 ACLKM5_RS10895 WP_005179768.1 2277407..2278444(+) (pilT) [Acinetobacter indicus strain D10_NDM_tet(X3)]
ATGGATATTACAGAACTATTGGCCTTTTCGGCAAAAAATGGGGCATCGGATTTACACCTGTCGGCAGGCATGCCGCCACT
GATTCGTGTGGATGGTGAAGTACGCCGCATCAATTTGCCCGCCTTGGAACATAAAGAAGTCCACAAGCTGGTCTATGACA
TCATGAACGACAAACAGCGCCGTGATTATGAAGATAACCTGGAAACCGACTTCTCGTTTGAAGTCCCGGGCGTGGCGCGT
TTCCGTGTTAACGCATTTAACCAGAACCGCGGTGCCGGCGCGGTGTTTCGTACCATTCCCTCTAAAGTGCTGACCATTGA
AGATTTGGGAATGGGTCAAATCTTTAGAGATATCTGTGACTATCCACGTGGTCTAGTGCTGGTCACGGGGCCGACGGGTT
CGGGTAAATCCACCACCCTGGCGGCGATGATTGACTATATCAATGACAATCGCTATGACCACATCCTGACCGTGGAAGAC
CCGATTGAATTTGTGCATCAGTCTAAAAAATGTCTGGTCAACCAGCGTGAAGTACATCGTGATACCCACGGCTTTAATGA
AGCACTACGTTCGGCGCTGCGTGAAGACCCGGATATTATTTTGGTCGGTGAGATGCGTGACCTGGAAACCATCCGTTTGG
CACTTACCGCGGCAGAAACCGGTCACCTGGTCTTTGGTACCCTGCATACCACCTCGGCGGCAAAAACCATTGACCGTGTG
ATTGACGTCTTTCCAGCCGAAGAAAAAGATATGGTGCGTGCCATGCTGTCTGAATCTTTACAGGCGGTCATTTCACAAAC
CCTGCTCAAGAAAAATGGCGGTGGCCGTGTGGCGGCGCATGAAATCATGATCGGGATTCCGGCCATCCGTAACCTGATTC
GTGAAAACAAGGTTGCACAGATGTACTCGGCCATTCAAACCGGTGCCAACTACGGTATGAGTACGCTGGACCAGAGCCTG
AAAGCCCTGGTCAGCCGTGGCGTGATCAGTCCACAGACCGCGCGTACTGTGGCGAAACAGCCAGAATCGTTCCTCTAA
ATGGATATTACAGAACTATTGGCCTTTTCGGCAAAAAATGGGGCATCGGATTTACACCTGTCGGCAGGCATGCCGCCACT
GATTCGTGTGGATGGTGAAGTACGCCGCATCAATTTGCCCGCCTTGGAACATAAAGAAGTCCACAAGCTGGTCTATGACA
TCATGAACGACAAACAGCGCCGTGATTATGAAGATAACCTGGAAACCGACTTCTCGTTTGAAGTCCCGGGCGTGGCGCGT
TTCCGTGTTAACGCATTTAACCAGAACCGCGGTGCCGGCGCGGTGTTTCGTACCATTCCCTCTAAAGTGCTGACCATTGA
AGATTTGGGAATGGGTCAAATCTTTAGAGATATCTGTGACTATCCACGTGGTCTAGTGCTGGTCACGGGGCCGACGGGTT
CGGGTAAATCCACCACCCTGGCGGCGATGATTGACTATATCAATGACAATCGCTATGACCACATCCTGACCGTGGAAGAC
CCGATTGAATTTGTGCATCAGTCTAAAAAATGTCTGGTCAACCAGCGTGAAGTACATCGTGATACCCACGGCTTTAATGA
AGCACTACGTTCGGCGCTGCGTGAAGACCCGGATATTATTTTGGTCGGTGAGATGCGTGACCTGGAAACCATCCGTTTGG
CACTTACCGCGGCAGAAACCGGTCACCTGGTCTTTGGTACCCTGCATACCACCTCGGCGGCAAAAACCATTGACCGTGTG
ATTGACGTCTTTCCAGCCGAAGAAAAAGATATGGTGCGTGCCATGCTGTCTGAATCTTTACAGGCGGTCATTTCACAAAC
CCTGCTCAAGAAAAATGGCGGTGGCCGTGTGGCGGCGCATGAAATCATGATCGGGATTCCGGCCATCCGTAACCTGATTC
GTGAAAACAAGGTTGCACAGATGTACTCGGCCATTCAAACCGGTGCCAACTACGGTATGAGTACGCTGGACCAGAGCCTG
AAAGCCCTGGTCAGCCGTGGCGTGATCAGTCCACAGACCGCGCGTACTGTGGCGAAACAGCCAGAATCGTTCCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
94.783 |
100 |
0.948 |
| pilT | Acinetobacter baumannii D1279779 |
94.493 |
100 |
0.945 |
| pilT | Acinetobacter baumannii strain A118 |
94.493 |
100 |
0.945 |
| pilT | Acinetobacter baylyi ADP1 |
86.919 |
99.71 |
0.867 |
| pilT | Pseudomonas stutzeri DSM 10701 |
84.012 |
99.71 |
0.838 |
| pilT | Pseudomonas aeruginosa PAK |
83.721 |
99.71 |
0.835 |
| pilT | Legionella pneumophila strain Lp02 |
74.128 |
99.71 |
0.739 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.128 |
99.71 |
0.739 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
100 |
0.681 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
100 |
0.678 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.048 |
97.391 |
0.672 |
| pilT | Vibrio cholerae strain A1552 |
69.048 |
97.391 |
0.672 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.884 |
100 |
0.519 |
| pilU | Vibrio cholerae strain A1552 |
42.09 |
97.101 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.101 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
37.861 |
100 |
0.38 |