Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACNPWN_RS06335 | Genome accession | NZ_CP182825 |
| Coordinates | 1273828..1274883 (+) | Length | 351 a.a. |
| NCBI ID | WP_119865138.1 | Uniprot ID | A0A343JBU0 |
| Organism | Clostridium isatidis strain BK32 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1268828..1279883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNPWN_RS06320 (ACNPWN_06320) | - | 1269378..1271003 (+) | 1626 | WP_119865140.1 | penicillin-binding transpeptidase domain-containing protein | - |
| ACNPWN_RS06325 (ACNPWN_06325) | - | 1271182..1272810 (-) | 1629 | Protein_1227 | IS1182 family transposase | - |
| ACNPWN_RS06330 (ACNPWN_06330) | sigK | 1273027..1273722 (+) | 696 | WP_119865139.1 | RNA polymerase sporulation sigma factor SigK | - |
| ACNPWN_RS06335 (ACNPWN_06335) | pilT | 1273828..1274883 (+) | 1056 | WP_119865138.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACNPWN_RS06340 (ACNPWN_06340) | ftsZ | 1275325..1276446 (+) | 1122 | WP_119865137.1 | cell division protein FtsZ | - |
| ACNPWN_RS06345 (ACNPWN_06345) | - | 1276609..1278237 (-) | 1629 | WP_119864227.1 | IS1182 family transposase | - |
| ACNPWN_RS06350 (ACNPWN_06350) | - | 1278509..1279306 (+) | 798 | WP_119865136.1 | sigma-E processing peptidase SpoIIGA | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38924.04 Da Isoelectric Point: 8.3354
>NTDB_id=1102652 ACNPWN_RS06335 WP_119865138.1 1273828..1274883(+) (pilT) [Clostridium isatidis strain BK32]
MYALKDLLSKTIEIGASDLHLTVGLAPTVRKNGTLEKVGDHKLTPSELREFAKEILAEKYAEYNEVGEIDTSYSISGIGR
FRVNIFKQRNSDAIAIRVIALKIPTLDELKHPKVIKEILKKQRGLVLVTGPTGSGKSTTLAAIINEINNTREAHIITLED
PIEYLHKHNKSIINQREIGKDSRTYESALKAILREDPDVILVGEMRDLETISIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLAAVLQGVISQQLVPTQKNNGRVAALEIMVTTPGIQNLIREGKTYQIESAIQTGGKYGMKTMDMA
LAELYKTGQIDLDTALSYSVDRETLKRIIMI
MYALKDLLSKTIEIGASDLHLTVGLAPTVRKNGTLEKVGDHKLTPSELREFAKEILAEKYAEYNEVGEIDTSYSISGIGR
FRVNIFKQRNSDAIAIRVIALKIPTLDELKHPKVIKEILKKQRGLVLVTGPTGSGKSTTLAAIINEINNTREAHIITLED
PIEYLHKHNKSIINQREIGKDSRTYESALKAILREDPDVILVGEMRDLETISIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLAAVLQGVISQQLVPTQKNNGRVAALEIMVTTPGIQNLIREGKTYQIESAIQTGGKYGMKTMDMA
LAELYKTGQIDLDTALSYSVDRETLKRIIMI
Nucleotide
Download Length: 1056 bp
>NTDB_id=1102652 ACNPWN_RS06335 WP_119865138.1 1273828..1274883(+) (pilT) [Clostridium isatidis strain BK32]
ATGTATGCATTAAAAGATCTATTAAGCAAAACTATAGAGATAGGAGCATCAGACTTACATTTAACAGTTGGATTAGCTCC
AACTGTAAGAAAAAATGGTACTTTAGAGAAAGTAGGTGATCATAAATTAACTCCTAGTGAATTAAGAGAATTTGCAAAAG
AAATATTAGCAGAAAAGTATGCTGAATACAATGAAGTGGGAGAAATCGATACTTCCTACTCAATTTCTGGAATTGGAAGA
TTTAGGGTAAATATATTTAAACAAAGAAATAGTGATGCTATTGCAATAAGAGTAATTGCATTAAAAATTCCTACTCTAGA
TGAATTAAAACATCCAAAAGTTATAAAAGAAATATTAAAAAAACAAAGGGGATTAGTTTTAGTAACAGGGCCAACTGGTA
GTGGTAAAAGTACTACCCTTGCGGCTATAATAAATGAAATAAATAATACAAGAGAAGCACATATTATAACGTTAGAGGAT
CCTATCGAATATCTTCATAAGCATAATAAATCAATTATTAATCAAAGAGAAATAGGAAAAGATAGTAGAACTTATGAAAG
TGCATTAAAAGCTATTTTAAGAGAAGATCCTGATGTTATCCTTGTAGGGGAGATGAGAGACCTGGAAACAATATCTATTG
CCTTAACAGCGGCAGAAACAGGACACTTAGTTTTCTCTACATTACATACAATAGGGGCAGCTAAGACAATAGATAGAATA
ATAGATGTTTTTCCGCCGCACCAACAGCAACAAATTAGAATCCAGCTTGCAGCAGTTTTACAAGGAGTAATATCGCAACA
ATTAGTTCCTACTCAAAAGAATAATGGAAGAGTTGCTGCTTTAGAAATTATGGTCACAACTCCAGGTATTCAAAATTTAA
TAAGAGAAGGAAAAACATATCAAATAGAATCAGCTATTCAAACTGGTGGAAAATATGGTATGAAAACAATGGATATGGCT
CTAGCTGAACTATATAAAACAGGACAAATAGATTTAGATACTGCTTTAAGTTATTCTGTAGATAGGGAAACTTTAAAAAG
AATTATAATGATTTAA
ATGTATGCATTAAAAGATCTATTAAGCAAAACTATAGAGATAGGAGCATCAGACTTACATTTAACAGTTGGATTAGCTCC
AACTGTAAGAAAAAATGGTACTTTAGAGAAAGTAGGTGATCATAAATTAACTCCTAGTGAATTAAGAGAATTTGCAAAAG
AAATATTAGCAGAAAAGTATGCTGAATACAATGAAGTGGGAGAAATCGATACTTCCTACTCAATTTCTGGAATTGGAAGA
TTTAGGGTAAATATATTTAAACAAAGAAATAGTGATGCTATTGCAATAAGAGTAATTGCATTAAAAATTCCTACTCTAGA
TGAATTAAAACATCCAAAAGTTATAAAAGAAATATTAAAAAAACAAAGGGGATTAGTTTTAGTAACAGGGCCAACTGGTA
GTGGTAAAAGTACTACCCTTGCGGCTATAATAAATGAAATAAATAATACAAGAGAAGCACATATTATAACGTTAGAGGAT
CCTATCGAATATCTTCATAAGCATAATAAATCAATTATTAATCAAAGAGAAATAGGAAAAGATAGTAGAACTTATGAAAG
TGCATTAAAAGCTATTTTAAGAGAAGATCCTGATGTTATCCTTGTAGGGGAGATGAGAGACCTGGAAACAATATCTATTG
CCTTAACAGCGGCAGAAACAGGACACTTAGTTTTCTCTACATTACATACAATAGGGGCAGCTAAGACAATAGATAGAATA
ATAGATGTTTTTCCGCCGCACCAACAGCAACAAATTAGAATCCAGCTTGCAGCAGTTTTACAAGGAGTAATATCGCAACA
ATTAGTTCCTACTCAAAAGAATAATGGAAGAGTTGCTGCTTTAGAAATTATGGTCACAACTCCAGGTATTCAAAATTTAA
TAAGAGAAGGAAAAACATATCAAATAGAATCAGCTATTCAAACTGGTGGAAAATATGGTATGAAAACAATGGATATGGCT
CTAGCTGAACTATATAAAACAGGACAAATAGATTTAGATACTGCTTTAAGTTATTCTGTAGATAGGGAAACTTTAAAAAG
AATTATAATGATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baylyi ADP1 |
49.271 |
97.721 |
0.481 |
| pilT | Pseudomonas aeruginosa PAK |
49.85 |
94.872 |
0.473 |
| pilT | Vibrio cholerae strain A1552 |
50.152 |
93.732 |
0.47 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.152 |
93.732 |
0.47 |
| pilT | Legionella pneumophila strain ERS1305867 |
49.107 |
95.726 |
0.47 |
| pilT | Legionella pneumophila strain Lp02 |
49.107 |
95.726 |
0.47 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.399 |
98.575 |
0.467 |
| pilT | Acinetobacter nosocomialis M2 |
47.813 |
97.721 |
0.467 |
| pilT | Acinetobacter baumannii D1279779 |
47.813 |
97.721 |
0.467 |
| pilT | Acinetobacter baumannii strain A118 |
47.813 |
97.721 |
0.467 |
| pilT | Pseudomonas stutzeri DSM 10701 |
48.949 |
94.872 |
0.464 |
| pilT | Neisseria meningitidis 8013 |
47.23 |
97.721 |
0.462 |
| pilT | Neisseria gonorrhoeae MS11 |
47.23 |
97.721 |
0.462 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.922 |
98.86 |
0.405 |
| pilU | Acinetobacter baylyi ADP1 |
41.124 |
96.296 |
0.396 |
| pilU | Vibrio cholerae strain A1552 |
39.286 |
95.726 |
0.376 |