Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACM67B_RS10940 | Genome accession | NZ_CP181247 |
| Coordinates | 2275751..2276794 (+) | Length | 347 a.a. |
| NCBI ID | WP_416189624.1 | Uniprot ID | - |
| Organism | Neisseria sp. CCUG17229 | ||
| Function | pseudopilus biogenesis (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2270751..2281794
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM67B_RS10920 (ACM67B_10920) | dksA | 2272852..2273268 (-) | 417 | WP_416189620.1 | RNA polymerase-binding protein DksA | - |
| ACM67B_RS10925 (ACM67B_10925) | - | 2273486..2274043 (-) | 558 | WP_416189621.1 | YggT family protein | - |
| ACM67B_RS10930 (ACM67B_10930) | proC | 2274048..2274845 (-) | 798 | WP_416189622.1 | pyrroline-5-carboxylate reductase | - |
| ACM67B_RS10935 (ACM67B_10935) | - | 2274926..2275621 (-) | 696 | WP_416189623.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACM67B_RS10940 (ACM67B_10940) | pilT | 2275751..2276794 (+) | 1044 | WP_416189624.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACM67B_RS10945 (ACM67B_10945) | - | 2276854..2278083 (+) | 1230 | WP_416189625.1 | PilT/PilU family type 4a pilus ATPase | - |
| ACM67B_RS10950 (ACM67B_10950) | yccS | 2278362..2280536 (+) | 2175 | WP_416189626.1 | YccS family putative transporter | - |
| ACM67B_RS10955 (ACM67B_10955) | - | 2280668..2281558 (+) | 891 | WP_416189627.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38364.88 Da Isoelectric Point: 7.0254
>NTDB_id=1099588 ACM67B_RS10940 WP_416189624.1 2275751..2276794(+) (pilT) [Neisseria sp. CCUG17229]
MQITDLLAFSVKNKASDLHLSSAMAPMIRLHGDIRRINLPEMDAEEVGTMVTSVMNDHQRKLYQQDLEVDFSFELPNVAR
FRVNAFTTERGPAAVFRTIPSSVLTLEELRAPRIFQKIADNPRGLVLVAGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFHNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEMVRSMLSESLRAVISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQIQSALQTGQSHGMQTLDQA
LQNLLRQGTISHEAARSKAQNSDTMIL
MQITDLLAFSVKNKASDLHLSSAMAPMIRLHGDIRRINLPEMDAEEVGTMVTSVMNDHQRKLYQQDLEVDFSFELPNVAR
FRVNAFTTERGPAAVFRTIPSSVLTLEELRAPRIFQKIADNPRGLVLVAGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFHNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEMVRSMLSESLRAVISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQIQSALQTGQSHGMQTLDQA
LQNLLRQGTISHEAARSKAQNSDTMIL
Nucleotide
Download Length: 1044 bp
>NTDB_id=1099588 ACM67B_RS10940 WP_416189624.1 2275751..2276794(+) (pilT) [Neisseria sp. CCUG17229]
ATGCAGATTACAGACTTACTGGCATTCAGCGTAAAGAATAAAGCATCTGACCTTCACTTAAGTTCGGCAATGGCTCCAAT
GATCCGCCTTCACGGCGACATCCGACGCATCAACTTACCGGAAATGGATGCCGAAGAAGTCGGCACCATGGTCACTTCGG
TCATGAACGACCACCAGCGCAAACTGTATCAGCAGGATTTAGAAGTCGATTTTTCGTTTGAATTACCTAATGTCGCGCGT
TTCCGTGTGAACGCATTCACCACCGAGCGCGGCCCTGCGGCGGTGTTCCGTACCATTCCCAGCAGCGTATTGACCTTAGA
AGAATTGCGCGCGCCGCGTATTTTCCAAAAAATCGCCGATAACCCGCGCGGCTTGGTGTTGGTGGCCGGCCCGACCGGTT
CAGGTAAATCGACCACTTTGGCGGCGATGATCAACTACATCAACGAAACCCAACCGGCGCACATTCTGACCATCGAAGAC
CCAATTGAGTTTGTGCATCAAAGCAAAAAAGCCCTGATTAACCAGCGCGAATTACACCAACACACCCACAGCTTCCACAA
CGCGCTGCGCTCTGCCCTGCGTGAAGACCCGGATGTGATTCTGATTGGTGAGATGCGCGACCCTGAAACCATCAGCTTGG
CCTTGACCGCCGCCGAAACCGGTCACTTAGTATTTGGCACATTGCACACCACCGGCGCGGCCAAAACCATCGACCGTATT
GTCGACGTATTCCCTGCAGGCGAAAAAGAAATGGTGCGCTCTATGCTTTCCGAATCGCTGCGTGCCGTGATTTCGCAAAC
CCTTTTGAAAACCCGCGACGGCAACGGCCGTGTGGCAGCGCATGAAATCCTGATTTCCACCCCTGCCGTGCGCAACCTGA
TTCGTGAAAACAAAATCGCGCAAATCCAATCGGCGCTGCAAACCGGCCAATCACACGGCATGCAAACCCTCGACCAAGCG
CTGCAAAACCTGCTGCGCCAAGGCACCATCAGCCACGAAGCCGCTCGCAGCAAAGCGCAAAACAGCGACACAATGATTCT
TTAA
ATGCAGATTACAGACTTACTGGCATTCAGCGTAAAGAATAAAGCATCTGACCTTCACTTAAGTTCGGCAATGGCTCCAAT
GATCCGCCTTCACGGCGACATCCGACGCATCAACTTACCGGAAATGGATGCCGAAGAAGTCGGCACCATGGTCACTTCGG
TCATGAACGACCACCAGCGCAAACTGTATCAGCAGGATTTAGAAGTCGATTTTTCGTTTGAATTACCTAATGTCGCGCGT
TTCCGTGTGAACGCATTCACCACCGAGCGCGGCCCTGCGGCGGTGTTCCGTACCATTCCCAGCAGCGTATTGACCTTAGA
AGAATTGCGCGCGCCGCGTATTTTCCAAAAAATCGCCGATAACCCGCGCGGCTTGGTGTTGGTGGCCGGCCCGACCGGTT
CAGGTAAATCGACCACTTTGGCGGCGATGATCAACTACATCAACGAAACCCAACCGGCGCACATTCTGACCATCGAAGAC
CCAATTGAGTTTGTGCATCAAAGCAAAAAAGCCCTGATTAACCAGCGCGAATTACACCAACACACCCACAGCTTCCACAA
CGCGCTGCGCTCTGCCCTGCGTGAAGACCCGGATGTGATTCTGATTGGTGAGATGCGCGACCCTGAAACCATCAGCTTGG
CCTTGACCGCCGCCGAAACCGGTCACTTAGTATTTGGCACATTGCACACCACCGGCGCGGCCAAAACCATCGACCGTATT
GTCGACGTATTCCCTGCAGGCGAAAAAGAAATGGTGCGCTCTATGCTTTCCGAATCGCTGCGTGCCGTGATTTCGCAAAC
CCTTTTGAAAACCCGCGACGGCAACGGCCGTGTGGCAGCGCATGAAATCCTGATTTCCACCCCTGCCGTGCGCAACCTGA
TTCGTGAAAACAAAATCGCGCAAATCCAATCGGCGCTGCAAACCGGCCAATCACACGGCATGCAAACCCTCGACCAAGCG
CTGCAAAACCTGCTGCGCCAAGGCACCATCAGCCACGAAGCCGCTCGCAGCAAAGCGCAAAACAGCGACACAATGATTCT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria gonorrhoeae MS11 |
85.507 |
99.424 |
0.85 |
| pilT | Neisseria meningitidis 8013 |
85.217 |
99.424 |
0.847 |
| pilT | Acinetobacter baumannii D1279779 |
69.075 |
99.712 |
0.689 |
| pilT | Acinetobacter baumannii strain A118 |
69.075 |
99.712 |
0.689 |
| pilT | Acinetobacter nosocomialis M2 |
69.075 |
99.712 |
0.689 |
| pilT | Pseudomonas stutzeri DSM 10701 |
70 |
97.983 |
0.686 |
| pilT | Acinetobacter baylyi ADP1 |
68.116 |
99.424 |
0.677 |
| pilT | Pseudomonas aeruginosa PAK |
68.824 |
97.983 |
0.674 |
| pilT | Legionella pneumophila strain Lp02 |
65.306 |
98.847 |
0.646 |
| pilT | Legionella pneumophila strain ERS1305867 |
65.306 |
98.847 |
0.646 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65 |
97.983 |
0.637 |
| pilT | Vibrio cholerae strain A1552 |
65 |
97.983 |
0.637 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.737 |
97.695 |
0.496 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.21 |
100 |
0.412 |
| pilU | Acinetobacter baylyi ADP1 |
39.08 |
100 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
38.617 |
100 |
0.386 |