Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACLB6K_RS15890 | Genome accession | NZ_CP177167 |
| Coordinates | 3265014..3266120 (+) | Length | 368 a.a. |
| NCBI ID | WP_123231223.1 | Uniprot ID | - |
| Organism | Microcystis aeruginosa FACHB-524 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3260014..3271120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLB6K_RS15875 (ACLB6K_15870) | - | 3261154..3261795 (+) | 642 | WP_123231221.1 | HAD-IA family hydrolase | - |
| ACLB6K_RS15880 (ACLB6K_15875) | grpE | 3261890..3262612 (-) | 723 | WP_002738986.1 | nucleotide exchange factor GrpE | - |
| ACLB6K_RS15885 (ACLB6K_15880) | pilB/pilB1 | 3262853..3264868 (+) | 2016 | WP_123231222.1 | GspE/PulE family protein | Machinery gene |
| ACLB6K_RS15890 (ACLB6K_15885) | pilT | 3265014..3266120 (+) | 1107 | WP_123231223.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACLB6K_RS15895 (ACLB6K_15890) | - | 3266262..3267476 (+) | 1215 | WP_002778013.1 | type II secretion system F family protein | - |
| ACLB6K_RS15900 (ACLB6K_15895) | - | 3267697..3270267 (-) | 2571 | WP_002738998.1 | TIGR03960 family B12-binding radical SAM protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40623.84 Da Isoelectric Point: 6.9681
>NTDB_id=1085764 ACLB6K_RS15890 WP_123231223.1 3265014..3266120(+) (pilT) [Microcystis aeruginosa FACHB-524]
MELMIEDLMEQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPEVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF
MELMIEDLMEQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPEVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF
Nucleotide
Download Length: 1107 bp
>NTDB_id=1085764 ACLB6K_RS15890 WP_123231223.1 3265014..3266120(+) (pilT) [Microcystis aeruginosa FACHB-524]
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACCCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGAAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGGTCTGAACATATTTTAACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCACTAAGAGCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCCGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACCCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGAAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGGTCTGAACATATTTTAACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCACTAAGAGCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCCGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
52.174 |
93.75 |
0.489 |
| pilT | Legionella pneumophila strain Lp02 |
52.174 |
93.75 |
0.489 |
| pilT | Pseudomonas aeruginosa PAK |
51.873 |
94.293 |
0.489 |
| pilT | Acinetobacter nosocomialis M2 |
51.009 |
94.293 |
0.481 |
| pilT | Acinetobacter baumannii strain A118 |
51.009 |
94.293 |
0.481 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.009 |
94.293 |
0.481 |
| pilT | Acinetobacter baumannii D1279779 |
51.009 |
94.293 |
0.481 |
| pilT | Acinetobacter baylyi ADP1 |
50.432 |
94.293 |
0.476 |
| pilT | Vibrio cholerae strain A1552 |
50.294 |
92.391 |
0.465 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.294 |
92.391 |
0.465 |
| pilT | Neisseria meningitidis 8013 |
49.558 |
92.12 |
0.457 |
| pilT | Neisseria gonorrhoeae MS11 |
49.263 |
92.12 |
0.454 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.714 |
95.109 |
0.435 |
| pilU | Vibrio cholerae strain A1552 |
37.64 |
96.739 |
0.364 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.892 |
95.38 |
0.361 |