Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACJPHY_RS29640 | Genome accession | NZ_CP176424 |
| Coordinates | 6380756..6381790 (+) | Length | 344 a.a. |
| NCBI ID | WP_003084552.1 | Uniprot ID | A0A0H2ZKV1 |
| Organism | Pseudomonas aeruginosa strain IGLPR01 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6375756..6386790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJPHY_RS29615 | - | 6376044..6378011 (-) | 1968 | WP_003084539.1 | dynamin-like GTPase family protein | - |
| ACJPHY_RS29620 | - | 6378119..6378415 (-) | 297 | WP_031628111.1 | DUF167 domain-containing protein | - |
| ACJPHY_RS29625 | - | 6378412..6379005 (-) | 594 | WP_003084544.1 | YggT family protein | - |
| ACJPHY_RS29630 | proC | 6379016..6379837 (-) | 822 | WP_003084546.1 | pyrroline-5-carboxylate reductase | - |
| ACJPHY_RS29635 | - | 6379849..6380541 (-) | 693 | WP_003084549.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACJPHY_RS29640 | pilT | 6380756..6381790 (+) | 1035 | WP_003084552.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACJPHY_RS29645 | pilU | 6381968..6383116 (+) | 1149 | WP_003110016.1 | type IV pilus ATPase PilU | Machinery gene |
| ACJPHY_RS29650 | czcD | 6383124..6384023 (-) | 900 | WP_003100957.1 | CDF family zinc transporter CzcD | - |
| ACJPHY_RS29655 | - | 6384177..6384581 (+) | 405 | WP_003084560.1 | NINE protein | - |
| ACJPHY_RS29660 | - | 6384824..6386197 (+) | 1374 | WP_003084562.1 | pyridoxal-phosphate dependent enzyme | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38020.89 Da Isoelectric Point: 6.8364
>NTDB_id=1080120 ACJPHY_RS29640 WP_003084552.1 6380756..6381790(+) (pilT) [Pseudomonas aeruginosa strain IGLPR01]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED
PIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVAKGLISRENAREKAKIPENF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED
PIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVAKGLISRENAREKAKIPENF
Nucleotide
Download Length: 1035 bp
>NTDB_id=1080120 ACJPHY_RS29640 WP_003084552.1 6380756..6381790(+) (pilT) [Pseudomonas aeruginosa strain IGLPR01]
ATGGATATTACCGAGCTGCTCGCCTTCAGTGCCAAACAGGGCGCTTCGGACCTGCACCTCTCCGCCGGCCTGCCGCCCAT
GATCCGGGTGGATGGCGATGTACGCCGGATCAACCTGCCACCGCTGGAACACAAGCAGGTGCATGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTTCGAGGAATTCCTCGAGACCGACTTCTCCTTCGAGGTGCCGGGCGTCGCGCGT
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCGGTATTCCGGACCATTCCCTCCAAGGTACTGACCATGGA
GGAGCTTGGCATGGGAGAAGTGTTCAAACGTGTTTCAGACGTCCCGCGCGGGCTGGTACTGGTCACCGGGCCGACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCGATGCTCGACTACCTGAACAACACCAAGTACCACCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTCCACGAATCGAAGAAGTGCCTGGTCAACCAGCGCGAGGTGCATCGCGACACCCTCGGCTTCAGCGA
AGCGCTGCGCTCGGCGCTGCGGGAGGACCCGGACATCATCCTGGTCGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACCGCGGCGGAGACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCGGCGGCGAAGACCATCGACCGGGTG
GTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTAATCTCGCAGAC
CCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGCATGCAGACCCTCGACATGTGCCTC
AAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGAATGCCCGCGAGAAGGCGAAGATCCCGGAAAACTTCTGA
ATGGATATTACCGAGCTGCTCGCCTTCAGTGCCAAACAGGGCGCTTCGGACCTGCACCTCTCCGCCGGCCTGCCGCCCAT
GATCCGGGTGGATGGCGATGTACGCCGGATCAACCTGCCACCGCTGGAACACAAGCAGGTGCATGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTTCGAGGAATTCCTCGAGACCGACTTCTCCTTCGAGGTGCCGGGCGTCGCGCGT
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCGGTATTCCGGACCATTCCCTCCAAGGTACTGACCATGGA
GGAGCTTGGCATGGGAGAAGTGTTCAAACGTGTTTCAGACGTCCCGCGCGGGCTGGTACTGGTCACCGGGCCGACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCGATGCTCGACTACCTGAACAACACCAAGTACCACCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTCCACGAATCGAAGAAGTGCCTGGTCAACCAGCGCGAGGTGCATCGCGACACCCTCGGCTTCAGCGA
AGCGCTGCGCTCGGCGCTGCGGGAGGACCCGGACATCATCCTGGTCGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACCGCGGCGGAGACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCGGCGGCGAAGACCATCGACCGGGTG
GTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTAATCTCGCAGAC
CCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGCATGCAGACCCTCGACATGTGCCTC
AAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGAATGCCCGCGAGAAGGCGAAGATCCCGGAAAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
100 |
100 |
1 |
| pilT | Pseudomonas stutzeri DSM 10701 |
94.186 |
100 |
0.942 |
| pilT | Acinetobacter baumannii D1279779 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baumannii strain A118 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter nosocomialis M2 |
84.012 |
100 |
0.84 |
| pilT | Acinetobacter baylyi ADP1 |
81.686 |
100 |
0.817 |
| pilT | Legionella pneumophila strain Lp02 |
74.556 |
98.256 |
0.733 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.556 |
98.256 |
0.733 |
| pilT | Neisseria meningitidis 8013 |
66.667 |
100 |
0.669 |
| pilT | Neisseria gonorrhoeae MS11 |
66.377 |
100 |
0.666 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.765 |
98.837 |
0.66 |
| pilT | Vibrio cholerae strain A1552 |
66.765 |
98.837 |
0.66 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.464 |
100 |
0.526 |
| pilU | Vibrio cholerae strain A1552 |
41.298 |
98.547 |
0.407 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
97.384 |
0.398 |
| pilU | Acinetobacter baylyi ADP1 |
39.306 |
100 |
0.395 |