Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACKGJP_RS17505 | Genome accession | NZ_CP176395 |
| Coordinates | 4214117..4215151 (+) | Length | 344 a.a. |
| NCBI ID | WP_409346900.1 | Uniprot ID | - |
| Organism | Paenibacillus sp. MBLB4367 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4209117..4220151
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKGJP_RS17490 (ACKGJP_17490) | tlp | 4209861..4210085 (-) | 225 | WP_409346897.1 | small acid-soluble spore protein Tlp | - |
| ACKGJP_RS17495 (ACKGJP_17495) | murA | 4210748..4212049 (+) | 1302 | WP_409346898.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACKGJP_RS17500 (ACKGJP_17500) | - | 4212401..4214059 (+) | 1659 | WP_409346899.1 | GspE/PulE family protein | - |
| ACKGJP_RS17505 (ACKGJP_17505) | pilT | 4214117..4215151 (+) | 1035 | WP_409346900.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACKGJP_RS17510 (ACKGJP_17510) | - | 4215228..4216439 (+) | 1212 | WP_409346901.1 | type II secretion system F family protein | - |
| ACKGJP_RS17515 (ACKGJP_17515) | - | 4216680..4217063 (+) | 384 | WP_409346902.1 | competence type IV pilus major pilin ComGC | - |
| ACKGJP_RS17520 (ACKGJP_17520) | - | 4217142..4217960 (+) | 819 | WP_409346903.1 | prepilin peptidase | - |
| ACKGJP_RS17525 (ACKGJP_17525) | pilM | 4218000..4219214 (+) | 1215 | WP_409346904.1 | type IV pilus biogenesis protein PilM | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37833.54 Da Isoelectric Point: 6.4163
>NTDB_id=1079888 ACKGJP_RS17505 WP_409346900.1 4214117..4215151(+) (pilT) [Paenibacillus sp. MBLB4367]
MEDLLKLAYQKGASDVHITVHSPVMLRINGQLRPIDDQPLMPQATMELAGELMSAEQKESFLDRGDLDFSYGIPDLCRFR
VNVYRQKGSAGMTIRLISNRIPAMEALGLPAIAEEFAKKPQGLLLVTGPTGSGKSTTLAAMIDYINRTRREHIITLEDPI
EFVHSHKSCIVNQREIGVDTNTFASGLRAALRQDPNVILVGEMRDLETISTAITAAETGHLVFGTLHTADAPQTIDRIVD
VFPPEAQQQIRVQLASVLLGVMAQRLLPTADGNGRVAAIEVLVNTPAVANLIRSEKVHQIRSAMQTGKAQGMQTMDNALR
ELLQQRRIHVEAAREAMFGFSELQ
MEDLLKLAYQKGASDVHITVHSPVMLRINGQLRPIDDQPLMPQATMELAGELMSAEQKESFLDRGDLDFSYGIPDLCRFR
VNVYRQKGSAGMTIRLISNRIPAMEALGLPAIAEEFAKKPQGLLLVTGPTGSGKSTTLAAMIDYINRTRREHIITLEDPI
EFVHSHKSCIVNQREIGVDTNTFASGLRAALRQDPNVILVGEMRDLETISTAITAAETGHLVFGTLHTADAPQTIDRIVD
VFPPEAQQQIRVQLASVLLGVMAQRLLPTADGNGRVAAIEVLVNTPAVANLIRSEKVHQIRSAMQTGKAQGMQTMDNALR
ELLQQRRIHVEAAREAMFGFSELQ
Nucleotide
Download Length: 1035 bp
>NTDB_id=1079888 ACKGJP_RS17505 WP_409346900.1 4214117..4215151(+) (pilT) [Paenibacillus sp. MBLB4367]
ATGGAAGATCTGTTAAAGCTCGCTTACCAAAAAGGGGCTTCCGACGTCCATATAACGGTCCACTCGCCAGTGATGCTGCG
TATCAACGGTCAGCTGCGTCCGATCGACGATCAGCCGCTTATGCCGCAAGCGACGATGGAACTGGCGGGAGAGCTGATGT
CCGCGGAGCAGAAGGAGTCTTTTCTGGATCGGGGTGATCTGGATTTCTCATACGGCATTCCAGATTTATGCCGATTTCGC
GTGAATGTTTATCGTCAAAAAGGTAGCGCAGGTATGACGATCCGGCTCATTTCGAATCGTATTCCCGCCATGGAAGCGTT
AGGCTTGCCTGCCATCGCCGAAGAATTTGCCAAGAAGCCGCAAGGCTTGCTGCTCGTCACAGGCCCGACCGGAAGCGGGA
AATCGACGACGCTGGCAGCTATGATCGATTACATAAACCGTACCCGCCGCGAGCATATCATCACTCTGGAAGATCCGATC
GAATTCGTTCATTCTCACAAGTCCTGCATTGTGAATCAAAGGGAAATCGGCGTCGATACGAATACTTTTGCAAGCGGGCT
GCGGGCCGCGCTGCGGCAGGATCCCAACGTTATCCTGGTCGGCGAGATGCGCGATCTGGAGACGATCAGTACGGCGATCA
CGGCTGCGGAAACGGGCCATCTCGTATTCGGAACGTTACATACTGCGGATGCGCCGCAAACGATCGATCGCATCGTCGAC
GTCTTCCCGCCGGAGGCGCAGCAGCAAATTCGCGTTCAGCTGGCATCGGTGCTGCTTGGCGTCATGGCCCAACGCTTGCT
TCCGACTGCGGACGGTAACGGACGCGTTGCCGCGATCGAGGTACTCGTTAATACGCCTGCCGTCGCCAATTTGATTCGAT
CGGAGAAGGTGCATCAAATTCGTTCTGCGATGCAAACCGGTAAGGCGCAAGGTATGCAGACGATGGATAATGCGCTTCGC
GAGCTTCTACAGCAGCGGCGTATCCATGTCGAAGCCGCACGGGAAGCCATGTTCGGCTTTAGCGAGCTTCAATAA
ATGGAAGATCTGTTAAAGCTCGCTTACCAAAAAGGGGCTTCCGACGTCCATATAACGGTCCACTCGCCAGTGATGCTGCG
TATCAACGGTCAGCTGCGTCCGATCGACGATCAGCCGCTTATGCCGCAAGCGACGATGGAACTGGCGGGAGAGCTGATGT
CCGCGGAGCAGAAGGAGTCTTTTCTGGATCGGGGTGATCTGGATTTCTCATACGGCATTCCAGATTTATGCCGATTTCGC
GTGAATGTTTATCGTCAAAAAGGTAGCGCAGGTATGACGATCCGGCTCATTTCGAATCGTATTCCCGCCATGGAAGCGTT
AGGCTTGCCTGCCATCGCCGAAGAATTTGCCAAGAAGCCGCAAGGCTTGCTGCTCGTCACAGGCCCGACCGGAAGCGGGA
AATCGACGACGCTGGCAGCTATGATCGATTACATAAACCGTACCCGCCGCGAGCATATCATCACTCTGGAAGATCCGATC
GAATTCGTTCATTCTCACAAGTCCTGCATTGTGAATCAAAGGGAAATCGGCGTCGATACGAATACTTTTGCAAGCGGGCT
GCGGGCCGCGCTGCGGCAGGATCCCAACGTTATCCTGGTCGGCGAGATGCGCGATCTGGAGACGATCAGTACGGCGATCA
CGGCTGCGGAAACGGGCCATCTCGTATTCGGAACGTTACATACTGCGGATGCGCCGCAAACGATCGATCGCATCGTCGAC
GTCTTCCCGCCGGAGGCGCAGCAGCAAATTCGCGTTCAGCTGGCATCGGTGCTGCTTGGCGTCATGGCCCAACGCTTGCT
TCCGACTGCGGACGGTAACGGACGCGTTGCCGCGATCGAGGTACTCGTTAATACGCCTGCCGTCGCCAATTTGATTCGAT
CGGAGAAGGTGCATCAAATTCGTTCTGCGATGCAAACCGGTAAGGCGCAAGGTATGCAGACGATGGATAATGCGCTTCGC
GAGCTTCTACAGCAGCGGCGTATCCATGTCGAAGCCGCACGGGAAGCCATGTTCGGCTTTAGCGAGCTTCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.853 |
96.802 |
0.512 |
| pilT | Legionella pneumophila strain Lp02 |
51.198 |
97.093 |
0.497 |
| pilT | Legionella pneumophila strain ERS1305867 |
51.198 |
97.093 |
0.497 |
| pilT | Pseudomonas aeruginosa PAK |
50.45 |
96.802 |
0.488 |
| pilT | Neisseria meningitidis 8013 |
49.405 |
97.674 |
0.483 |
| pilT | Neisseria gonorrhoeae MS11 |
49.405 |
97.674 |
0.483 |
| pilT | Pseudomonas stutzeri DSM 10701 |
49.55 |
96.802 |
0.48 |
| pilT | Acinetobacter baylyi ADP1 |
49.699 |
96.512 |
0.48 |
| pilT | Acinetobacter baumannii D1279779 |
49.102 |
97.093 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
49.102 |
97.093 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
49.102 |
97.093 |
0.477 |
| pilT | Vibrio cholerae strain A1552 |
48.598 |
93.314 |
0.453 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.598 |
93.314 |
0.453 |
| pilU | Pseudomonas stutzeri DSM 10701 |
44.144 |
96.802 |
0.427 |
| pilU | Vibrio cholerae strain A1552 |
43.671 |
91.86 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
41.033 |
95.64 |
0.392 |