Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | ACJEHK_RS11420 | Genome accession | NZ_CP174242 |
| Coordinates | 2574175..2575296 (-) | Length | 373 a.a. |
| NCBI ID | WP_011216215.1 | Uniprot ID | Q5WUC5 |
| Organism | Legionella pneumophila strain SPF583 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2569175..2580296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHK_RS11405 (ACJEHK_11405) | - | 2570057..2570494 (-) | 438 | WP_015444141.1 | hypothetical protein | - |
| ACJEHK_RS11410 (ACJEHK_11410) | - | 2570775..2572070 (+) | 1296 | WP_011216213.1 | serine/threonine transporter | - |
| ACJEHK_RS11415 (ACJEHK_11415) | ankK | 2572163..2574088 (-) | 1926 | WP_011216214.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| ACJEHK_RS11420 (ACJEHK_11420) | pilU | 2574175..2575296 (-) | 1122 | WP_011216215.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACJEHK_RS11425 (ACJEHK_11425) | - | 2575386..2577314 (-) | 1929 | WP_011216216.1 | hypothetical protein | - |
| ACJEHK_RS11430 (ACJEHK_11430) | - | 2577602..2578402 (-) | 801 | WP_011216217.1 | phytanoyl-CoA dioxygenase family protein | - |
| ACJEHK_RS11435 (ACJEHK_11435) | radA | 2578435..2579790 (-) | 1356 | WP_027265192.1 | DNA repair protein RadA | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41673.95 Da Isoelectric Point: 5.4724
>NTDB_id=1076399 ACJEHK_RS11420 WP_011216215.1 2574175..2575296(-) (pilU) [Legionella pneumophila strain SPF583]
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEAMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEAMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
Nucleotide
Download Length: 1122 bp
>NTDB_id=1076399 ACJEHK_RS11420 WP_011216215.1 2574175..2575296(-) (pilU) [Legionella pneumophila strain SPF583]
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGCTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGAAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAAATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACGGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGACAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGCCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAACTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCTATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAAGGTTT
GA
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGCTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGAAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAAATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACGGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGACAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGCCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAACTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCTATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAAGGTTT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
55.367 |
94.906 |
0.525 |
| pilU | Acinetobacter baylyi ADP1 |
52.958 |
95.174 |
0.504 |
| pilU | Vibrio cholerae strain A1552 |
48.286 |
93.834 |
0.453 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.133 |
90.885 |
0.41 |
| pilT | Legionella pneumophila strain Lp02 |
43.275 |
91.689 |
0.397 |
| pilT | Legionella pneumophila strain ERS1305867 |
43.275 |
91.689 |
0.397 |
| pilT | Pseudomonas aeruginosa PAK |
42.857 |
91.957 |
0.394 |
| pilT | Neisseria meningitidis 8013 |
42.075 |
93.029 |
0.391 |
| pilT | Neisseria gonorrhoeae MS11 |
42.075 |
93.029 |
0.391 |
| pilT | Acinetobacter nosocomialis M2 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter baumannii D1279779 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter baumannii strain A118 |
43.413 |
89.544 |
0.389 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.983 |
91.957 |
0.386 |
| pilT | Acinetobacter baylyi ADP1 |
40.882 |
91.153 |
0.373 |
| pilT | Vibrio cholerae strain A1552 |
41.945 |
88.204 |
0.37 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.945 |
88.204 |
0.37 |