Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AABA48_RS16755 | Genome accession | NZ_AP028967 |
| Coordinates | 3663684..3664754 (+) | Length | 356 a.a. |
| NCBI ID | WP_324309434.1 | Uniprot ID | - |
| Organism | Geobacter sp. 60473 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3658684..3669754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABA48_RS16745 (GEO60473_33020) | - | 3660843..3661847 (-) | 1005 | WP_286351397.1 | hypothetical protein | - |
| AABA48_RS16750 (GEO60473_33030) | - | 3662021..3663670 (+) | 1650 | WP_286351398.1 | ATPase, T2SS/T4P/T4SS family | - |
| AABA48_RS16755 (GEO60473_33040) | pilT | 3663684..3664754 (+) | 1071 | WP_324309434.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AABA48_RS16760 (GEO60473_33050) | - | 3664784..3665218 (-) | 435 | WP_338270731.1 | hypothetical protein | - |
| AABA48_RS16765 (GEO60473_33060) | - | 3665451..3666002 (-) | 552 | WP_066356858.1 | hypothetical protein | - |
| AABA48_RS16775 (GEO60473_33070) | - | 3666946..3667203 (+) | 258 | WP_324309437.1 | hypothetical protein | - |
| AABA48_RS16780 | - | 3667333..3667431 (+) | 99 | Protein_3298 | SEC-C metal-binding domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39670.84 Da Isoelectric Point: 7.2650
>NTDB_id=107635 AABA48_RS16755 WP_324309434.1 3663684..3664754(+) (pilT) [Geobacter sp. 60473]
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTTILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLAEKPGQ
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTTILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLAEKPGQ
Nucleotide
Download Length: 1071 bp
>NTDB_id=107635 AABA48_RS16755 WP_324309434.1 3663684..3664754(+) (pilT) [Geobacter sp. 60473]
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAGGGGGCCTCCGACCTCCACCTGTCGTCGGGGGCTCCGCC
CATTTTCAGGCTCCACGGGGAGATGGCGCGGCAGAACTTCAAGGTTCTCTCCCATGAGGAACTGACGACCATTCTCTATG
AAATCCTGACCGACAAGCAGAAGGCTGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACTCATCGGGGCATCGCTGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTCCGCCGCATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCTCTGAGCTTCTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGATCTGGAGACCATAGGCC
TCGCCATGAGCGCCGCCGAGACCGGCCACCTGGTGTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCCCTCAAAGGGGTAGTCTGCCA
GCAGCTTCTCAAGACCGCCGACGGCAAGGGGCGGGTCGCGGCCCTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACCGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CATCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGGCGGAGAAGCCGGGCCAGTAG
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAGGGGGCCTCCGACCTCCACCTGTCGTCGGGGGCTCCGCC
CATTTTCAGGCTCCACGGGGAGATGGCGCGGCAGAACTTCAAGGTTCTCTCCCATGAGGAACTGACGACCATTCTCTATG
AAATCCTGACCGACAAGCAGAAGGCTGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACTCATCGGGGCATCGCTGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTCCGCCGCATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCTCTGAGCTTCTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGATCTGGAGACCATAGGCC
TCGCCATGAGCGCCGCCGAGACCGGCCACCTGGTGTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCCCTCAAAGGGGTAGTCTGCCA
GCAGCTTCTCAAGACCGCCGACGGCAAGGGGCGGGTCGCGGCCCTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACCGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CATCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGGCGGAGAAGCCGGGCCAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
58.308 |
92.978 |
0.542 |
| pilT | Legionella pneumophila strain Lp02 |
58.308 |
92.978 |
0.542 |
| pilT | Pseudomonas stutzeri DSM 10701 |
55.977 |
96.348 |
0.539 |
| pilT | Pseudomonas aeruginosa PAK |
55.394 |
96.348 |
0.534 |
| pilT | Acinetobacter baylyi ADP1 |
55.394 |
96.348 |
0.534 |
| pilT | Acinetobacter baumannii strain A118 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter nosocomialis M2 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter baumannii D1279779 |
54.519 |
96.348 |
0.525 |
| pilT | Neisseria gonorrhoeae MS11 |
54.678 |
96.067 |
0.525 |
| pilT | Neisseria meningitidis 8013 |
54.678 |
96.067 |
0.525 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.061 |
96.348 |
0.511 |
| pilT | Vibrio cholerae strain A1552 |
53.012 |
93.258 |
0.494 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.012 |
93.258 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
40 |
95.506 |
0.382 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.06 |
93.258 |
0.374 |
| pilU | Acinetobacter baylyi ADP1 |
38.806 |
94.101 |
0.365 |