Detailed information NTG1067649

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: ACFSN5_RS00820
• Genome accession: NZ_CP172427
• Coordinates: 145402..145728 (+)
• Length: 108 a.a.
• NCBI ID: WP_165212393.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZJ 1593
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 140402..150728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFSN5_RS00805 (ACFSN5_00805)	-	142983..143357 (+)	375	WP_165329442.1	DUF1033 family protein	-
ACFSN5_RS00810 (ACFSN5_00810)	comGA/cglA	143491..144438 (+)	948	WP_165212397.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFSN5_RS00815 (ACFSN5_00815)	comYB	144362..145405 (+)	1044	WP_277423768.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACFSN5_RS00820 (ACFSN5_00820)	comYC	145402..145728 (+)	327	WP_165212393.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFSN5_RS00825 (ACFSN5_00825)	comYD	145682..146116 (+)	435	WP_165212383.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACFSN5_RS00830 (ACFSN5_00830)	comYE	146088..146381 (+)	294	WP_165212381.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACFSN5_RS00835 (ACFSN5_00835)	comYF	146365..146802 (+)	438	WP_165212379.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACFSN5_RS00840 (ACFSN5_00840)	comGG	146780..147238 (+)	459	WP_165212377.1	competence type IV pilus minor pilin ComGG	-
ACFSN5_RS00845 (ACFSN5_00845)	comYH	147415..148368 (+)	954	WP_165212375.1	class I SAM-dependent methyltransferase	Machinery gene
ACFSN5_RS00850 (ACFSN5_00850)	-	148431..149627 (+)	1197	WP_165212373.1	acetate kinase	-
ACFSN5_RS00855 (ACFSN5_00855)	-	149812..150714 (+)	903	WP_165212371.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12187.40 Da
• Isoelectric Point: 10.2400

>NTDB_id=1067649 ACFSN5_RS00820 WP_165212393.1 145402..145728(+) (comYC) [Streptococcus sp. ZJ 1593]
MMKKLLKRLKGKKVKAFTLLEMLIVLLIISVLLLLFVPNLAKQKDKVKDTGGAAVVKVVESQAELYELNHTDDATVSKLV
SSGDITQKQADSYNDYYKKHKENRQVPN

Nucleotide

• Length: 327 bp

>NTDB_id=1067649 ACFSN5_RS00820 WP_165212393.1 145402..145728(+) (comYC) [Streptococcus sp. ZJ 1593]
ATGATGAAAAAATTACTCAAACGTTTAAAAGGAAAGAAAGTCAAAGCTTTCACTCTTCTTGAAATGTTAATAGTTCTGTT
AATTATCAGTGTTCTGCTCTTGCTTTTTGTGCCTAACTTAGCCAAGCAGAAGGATAAAGTTAAGGATACTGGTGGTGCGG
CCGTTGTCAAGGTGGTAGAAAGCCAGGCCGAACTTTATGAATTAAACCATACAGACGATGCCACGGTGTCTAAACTAGTG
TCCAGTGGAGATATCACACAAAAACAAGCGGATTCTTACAATGATTATTACAAGAAACATAAGGAAAATCGGCAGGTTCC
GAACTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (12-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA159	75	96.296	0.722
comYC	Streptococcus mutans UA140	75	96.296	0.722
comYC	Streptococcus gordonii str. Challis substr. CH1	68.571	97.222	0.667
comGC/cglC	Streptococcus mitis SK321	66.038	98.148	0.648
comGC/cglC	Streptococcus pneumoniae TIGR4	62.264	98.148	0.611
comGC/cglC	Streptococcus pneumoniae Rx1	62.264	98.148	0.611
comGC/cglC	Streptococcus pneumoniae D39	62.264	98.148	0.611
comGC/cglC	Streptococcus pneumoniae R6	62.264	98.148	0.611
comGC/cglC	Streptococcus mitis NCTC 12261	61.682	99.074	0.611
comGC	Lactococcus lactis subsp. cremoris KW2	61	92.593	0.565
comYC	Streptococcus suis isolate S10	63.636	81.481	0.519
comGC	Staphylococcus aureus MW2	49.367	73.148	0.361
comGC	Staphylococcus aureus N315	49.367	73.148	0.361