Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACFSN5_RS00845 | Genome accession | NZ_CP172427 |
| Coordinates | 147415..148368 (+) | Length | 317 a.a. |
| NCBI ID | WP_165212375.1 | Uniprot ID | - |
| Organism | Streptococcus sp. ZJ 1593 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 142415..153368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFSN5_RS00805 (ACFSN5_00805) | - | 142983..143357 (+) | 375 | WP_165329442.1 | DUF1033 family protein | - |
| ACFSN5_RS00810 (ACFSN5_00810) | comGA/cglA | 143491..144438 (+) | 948 | WP_165212397.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFSN5_RS00815 (ACFSN5_00815) | comYB | 144362..145405 (+) | 1044 | WP_277423768.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFSN5_RS00820 (ACFSN5_00820) | comYC | 145402..145728 (+) | 327 | WP_165212393.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFSN5_RS00825 (ACFSN5_00825) | comYD | 145682..146116 (+) | 435 | WP_165212383.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFSN5_RS00830 (ACFSN5_00830) | comYE | 146088..146381 (+) | 294 | WP_165212381.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACFSN5_RS00835 (ACFSN5_00835) | comYF | 146365..146802 (+) | 438 | WP_165212379.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFSN5_RS00840 (ACFSN5_00840) | comGG | 146780..147238 (+) | 459 | WP_165212377.1 | competence type IV pilus minor pilin ComGG | - |
| ACFSN5_RS00845 (ACFSN5_00845) | comYH | 147415..148368 (+) | 954 | WP_165212375.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACFSN5_RS00850 (ACFSN5_00850) | - | 148431..149627 (+) | 1197 | WP_165212373.1 | acetate kinase | - |
| ACFSN5_RS00855 (ACFSN5_00855) | - | 149812..150714 (+) | 903 | WP_165212371.1 | LysR family transcriptional regulator | - |
| ACFSN5_RS00860 (ACFSN5_00860) | - | 150845..151111 (+) | 267 | WP_165212369.1 | ACT domain-containing protein | - |
| ACFSN5_RS00865 (ACFSN5_00865) | - | 151123..152460 (+) | 1338 | WP_165212367.1 | PFL family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35916.71 Da Isoelectric Point: 4.2375
>NTDB_id=1067653 ACFSN5_RS00845 WP_165212375.1 147415..148368(+) (comYH) [Streptococcus sp. ZJ 1593]
MNFEKIEKAYELLLENVQLLQNNLKTNSYDALIEQNALYLDGKTENEEILANNQALRQLELTKEEWRRAYQFLFIKMAQS
EPLQANHQFTPDSIGFVLLFLLENLTKNERLDVLEIGSGTGNLAQTLINNSSRQLDYMGLEVDDLLIDLSASIADVVGSE
GSFVQEDAVRPQLIKESDIIVSDLPVGYYPNDTIASRYQVAAQNEHTYAHHLLMEQSLKYLKAQGFAIFLAPVNLLTSPQ
SDLLKGWLKGYADIVAVIALPEELFGNPVNAKSIFVLQKQSSQAPETFVYPLSDLQDRDNLLDFMENFKKWSADYIL
MNFEKIEKAYELLLENVQLLQNNLKTNSYDALIEQNALYLDGKTENEEILANNQALRQLELTKEEWRRAYQFLFIKMAQS
EPLQANHQFTPDSIGFVLLFLLENLTKNERLDVLEIGSGTGNLAQTLINNSSRQLDYMGLEVDDLLIDLSASIADVVGSE
GSFVQEDAVRPQLIKESDIIVSDLPVGYYPNDTIASRYQVAAQNEHTYAHHLLMEQSLKYLKAQGFAIFLAPVNLLTSPQ
SDLLKGWLKGYADIVAVIALPEELFGNPVNAKSIFVLQKQSSQAPETFVYPLSDLQDRDNLLDFMENFKKWSADYIL
Nucleotide
Download Length: 954 bp
>NTDB_id=1067653 ACFSN5_RS00845 WP_165212375.1 147415..148368(+) (comYH) [Streptococcus sp. ZJ 1593]
ATGAATTTTGAGAAGATTGAAAAAGCTTATGAGCTGCTTTTGGAAAACGTCCAGCTCCTACAAAATAACCTAAAAACTAA
TAGTTATGATGCTCTGATTGAGCAGAATGCTCTCTATTTGGATGGTAAGACTGAGAATGAAGAAATTCTTGCTAATAATC
AAGCCTTGCGACAGCTTGAATTGACCAAGGAAGAATGGAGACGAGCCTACCAGTTTCTATTTATCAAGATGGCTCAGTCT
GAGCCTCTGCAAGCTAACCACCAGTTTACGCCAGACAGCATTGGCTTTGTTCTGCTTTTCTTGCTGGAAAATCTAACTAA
AAACGAAAGGCTGGATGTTCTGGAAATTGGTTCTGGGACTGGCAATTTAGCTCAGACGCTCATTAACAACAGCAGTAGAC
AGCTGGATTACATGGGGTTGGAAGTTGACGACTTACTGATTGATTTATCAGCTAGTATCGCTGATGTGGTGGGCTCAGAA
GGGAGTTTTGTACAGGAAGACGCTGTGCGGCCCCAGCTGATTAAAGAAAGCGATATTATTGTTAGTGATCTTCCTGTTGG
CTACTATCCTAATGATACTATAGCTAGTCGCTATCAGGTGGCTGCTCAAAATGAACATACCTATGCCCATCATTTGCTGA
TGGAGCAGTCACTTAAATACTTGAAGGCTCAGGGCTTTGCTATCTTTCTAGCTCCGGTTAATCTGTTGACTAGTCCTCAG
AGCGATTTGCTTAAAGGCTGGCTCAAGGGTTACGCAGACATTGTGGCGGTCATTGCTCTACCAGAGGAACTCTTTGGCAA
TCCTGTTAATGCTAAGTCTATCTTTGTCTTGCAAAAGCAGAGCAGTCAGGCACCCGAGACTTTTGTTTATCCTCTGAGTG
ATTTGCAGGACCGTGACAATCTCCTAGATTTTATGGAAAATTTCAAGAAATGGTCAGCTGATTATATTCTTTGA
ATGAATTTTGAGAAGATTGAAAAAGCTTATGAGCTGCTTTTGGAAAACGTCCAGCTCCTACAAAATAACCTAAAAACTAA
TAGTTATGATGCTCTGATTGAGCAGAATGCTCTCTATTTGGATGGTAAGACTGAGAATGAAGAAATTCTTGCTAATAATC
AAGCCTTGCGACAGCTTGAATTGACCAAGGAAGAATGGAGACGAGCCTACCAGTTTCTATTTATCAAGATGGCTCAGTCT
GAGCCTCTGCAAGCTAACCACCAGTTTACGCCAGACAGCATTGGCTTTGTTCTGCTTTTCTTGCTGGAAAATCTAACTAA
AAACGAAAGGCTGGATGTTCTGGAAATTGGTTCTGGGACTGGCAATTTAGCTCAGACGCTCATTAACAACAGCAGTAGAC
AGCTGGATTACATGGGGTTGGAAGTTGACGACTTACTGATTGATTTATCAGCTAGTATCGCTGATGTGGTGGGCTCAGAA
GGGAGTTTTGTACAGGAAGACGCTGTGCGGCCCCAGCTGATTAAAGAAAGCGATATTATTGTTAGTGATCTTCCTGTTGG
CTACTATCCTAATGATACTATAGCTAGTCGCTATCAGGTGGCTGCTCAAAATGAACATACCTATGCCCATCATTTGCTGA
TGGAGCAGTCACTTAAATACTTGAAGGCTCAGGGCTTTGCTATCTTTCTAGCTCCGGTTAATCTGTTGACTAGTCCTCAG
AGCGATTTGCTTAAAGGCTGGCTCAAGGGTTACGCAGACATTGTGGCGGTCATTGCTCTACCAGAGGAACTCTTTGGCAA
TCCTGTTAATGCTAAGTCTATCTTTGTCTTGCAAAAGCAGAGCAGTCAGGCACCCGAGACTTTTGTTTATCCTCTGAGTG
ATTTGCAGGACCGTGACAATCTCCTAGATTTTATGGAAAATTTCAAGAAATGGTCAGCTGATTATATTCTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.192 |
100 |
0.672 |
| comYH | Streptococcus mutans UA140 |
66.562 |
100 |
0.666 |