Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilT   Type   Machinery gene
Locus tag   ACE1C5_RS01260 Genome accession   NZ_CP170124
Coordinates   275834..276880 (-) Length   348 a.a.
NCBI ID   WP_064619570.1    Uniprot ID   A0A7Z0UXL8
Organism   Moraxella sp. ATCC 23246     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 270834..281880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1C5_RS01235 (ACE1C5_01235) - 271212..272747 (+) 1536 WP_064619499.1 YadA-like family protein -
  ACE1C5_RS01240 (ACE1C5_01240) - 272886..273773 (-) 888 WP_064604207.1 LysR family transcriptional regulator -
  ACE1C5_RS01245 (ACE1C5_01245) - 274036..274668 (+) 633 WP_064619496.1 DedA family protein -
  ACE1C5_RS01250 (ACE1C5_01250) - 274713..275087 (-) 375 WP_064619573.1 outer membrane protein assembly factor BamE -
  ACE1C5_RS01255 (ACE1C5_01255) fur 275324..275764 (+) 441 WP_064619495.1 ferric iron uptake transcriptional regulator -
  ACE1C5_RS01260 (ACE1C5_01260) pilT 275834..276880 (-) 1047 WP_064619570.1 type IV pilus twitching motility protein PilT Machinery gene
  ACE1C5_RS01265 (ACE1C5_01265) - 276998..277708 (+) 711 WP_064619492.1 YggS family pyridoxal phosphate-dependent enzyme -
  ACE1C5_RS01270 (ACE1C5_01270) - 277761..279452 (-) 1692 WP_064619489.1 NAD+ synthase -
  ACE1C5_RS01275 (ACE1C5_01275) - 279702..279977 (+) 276 WP_064619486.1 hypothetical protein -
  ACE1C5_RS01280 (ACE1C5_01280) - 280039..280386 (-) 348 WP_064619483.1 cell division protein ZapA -
  ACE1C5_RS01285 (ACE1C5_01285) - 280423..280782 (-) 360 WP_064607976.1 hypothetical protein -
  ACE1C5_RS01290 (ACE1C5_01290) - 281076..281714 (+) 639 WP_064619480.1 UPF0149 family protein -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 38709.51 Da        Isoelectric Point: 7.2901

>NTDB_id=1055214 ACE1C5_RS01260 WP_064619570.1 275834..276880(-) (pilT) [Moraxella sp. ATCC 23246]
MLNLKDLLVFAHNQGASDLHLSAQQPVMLRIDGNLLPMDITPIDTDSIMQMLRLVMDDTDYRQWQHNLEHDFVLSLDGIA
RFRVNVFFQAHGAAAVFRVIQAKVPTLRRLIDDDRIYDSLRQITTLRAGLVLVTGATGSGKSTTLASFIDHINQHQKKHI
ITIEDPIEYEHVSKLSLINQRQVGKDTRSFQNALRSALREDPDVILVGELRDLETIRLALTAAETGHLVLATLHTVNAPK
SIDRIIEVFDAAEKHMIRTMLADSLKAVIAQRLLPAQGGGRVAAFEILTHTPAVANLIRENKISQLPSVIQTSSAQGMIS
LSHHLSRLVSSGKISPDTANHHAQERLF

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=1055214 ACE1C5_RS01260 WP_064619570.1 275834..276880(-) (pilT) [Moraxella sp. ATCC 23246]
ATGCTCAATCTTAAAGATCTGTTGGTTTTTGCACACAATCAAGGCGCATCAGATTTACATTTATCCGCCCAACAGCCCGT
TATGCTGCGTATTGATGGCAATCTTTTGCCCATGGACATCACGCCCATTGATACAGATAGTATCATGCAGATGCTACGCC
TTGTGATGGATGACACAGATTATCGCCAATGGCAACACAATCTTGAACATGATTTTGTACTTTCACTTGATGGCATCGCT
CGCTTTCGGGTGAATGTATTTTTTCAGGCACACGGTGCGGCGGCTGTTTTTCGGGTGATTCAAGCCAAAGTGCCCACACT
TAGGCGGTTAATTGATGATGATCGAATTTATGACAGCCTGCGACAAATCACGACACTGCGCGCAGGCTTAGTGCTTGTTA
CAGGCGCGACAGGCTCGGGTAAATCAACGACACTTGCCAGTTTCATCGACCACATCAACCAACACCAAAAAAAGCACATT
ATCACCATTGAAGACCCCATTGAATATGAGCATGTCTCCAAGCTTTCTCTGATTAATCAAAGGCAAGTCGGTAAAGATAC
CCGAAGCTTTCAAAATGCCCTACGCTCAGCATTGCGTGAAGATCCTGATGTGATCTTGGTCGGTGAGCTGCGCGATCTTG
AGACCATTCGCTTGGCGCTGACAGCTGCCGAAACTGGGCATTTGGTACTAGCAACCTTGCACACGGTCAACGCCCCAAAG
AGTATTGATCGTATCATTGAGGTTTTTGATGCTGCTGAAAAGCACATGATTCGCACGATGCTCGCTGACTCACTAAAGGC
AGTGATCGCCCAACGGCTATTGCCTGCCCAAGGTGGCGGTCGTGTGGCAGCGTTTGAGATTCTCACTCACACGCCTGCGG
TTGCCAATCTTATTCGCGAAAATAAAATCTCGCAGCTGCCTTCTGTCATCCAGACCAGCTCAGCCCAAGGCATGATCAGT
CTGAGTCATCATCTATCACGCCTGGTCTCATCTGGTAAAATCAGCCCAGATACCGCCAATCATCATGCCCAAGAGCGGCT
ATTTTAA

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(11-275)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z0UXL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilT Acinetobacter nosocomialis M2

52.907

98.851

0.523
  pilT Acinetobacter baumannii D1279779

52.616

98.851

0.52
  pilT Acinetobacter baumannii strain A118

52.616

98.851

0.52
  pilT Neisseria meningitidis 8013

52.616

98.851

0.52
  pilT Pseudomonas stutzeri DSM 10701

52.616

98.851

0.52
  pilT Acinetobacter baylyi ADP1

53.55

97.126

0.52
  pilT Neisseria gonorrhoeae MS11

52.326

98.851

0.517
  pilT Legionella pneumophila strain Lp02

51.754

98.276

0.509
  pilT Legionella pneumophila strain ERS1305867

51.754

98.276

0.509
  pilT Pseudomonas aeruginosa PAK

51.603

98.563

0.509
  pilT Vibrio cholerae O1 biovar El Tor strain E7946

52.553

95.69

0.503
  pilT Vibrio cholerae strain A1552

52.553

95.69

0.503
  pilT Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.476

94.253

0.457
  pilU Acinetobacter baylyi ADP1

39.826

98.851

0.394
  pilU Pseudomonas stutzeri DSM 10701

39.942

98.563

0.394
  pilU Vibrio cholerae strain A1552

39.21

94.54

0.371

Multiple sequence alignment