Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACEPXG_RS11215 | Genome accession | NZ_CP168496 |
| Coordinates | 2317828..2318868 (-) | Length | 346 a.a. |
| NCBI ID | WP_391202210.1 | Uniprot ID | - |
| Organism | Psychrobacillus sp. L4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2312828..2323868
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPXG_RS11190 (ACEPXG_11190) | pilO | 2313685..2314371 (-) | 687 | WP_391202195.1 | type 4a pilus biogenesis protein PilO | - |
| ACEPXG_RS11195 (ACEPXG_11195) | - | 2314368..2314958 (-) | 591 | WP_391202198.1 | PilN domain-containing protein | - |
| ACEPXG_RS11200 (ACEPXG_11200) | pilM | 2314958..2315932 (-) | 975 | WP_391202201.1 | type IV pilus biogenesis protein PilM | - |
| ACEPXG_RS11205 (ACEPXG_11205) | - | 2316066..2316590 (-) | 525 | WP_391202204.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ACEPXG_RS11210 (ACEPXG_11210) | - | 2316623..2317828 (-) | 1206 | WP_391202207.1 | type II secretion system F family protein | - |
| ACEPXG_RS11215 (ACEPXG_11215) | pilT | 2317828..2318868 (-) | 1041 | WP_391202210.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACEPXG_RS11220 (ACEPXG_11220) | - | 2318880..2320544 (-) | 1665 | WP_391209886.1 | GspE/PulE family protein | - |
| ACEPXG_RS11225 (ACEPXG_11225) | - | 2320565..2321908 (-) | 1344 | WP_391202212.1 | VanW family protein | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 38205.99 Da Isoelectric Point: 6.8339
>NTDB_id=1044271 ACEPXG_RS11215 WP_391202210.1 2317828..2318868(-) (pilT) [Psychrobacillus sp. L4]
MKTSIIQLLEKSFQDKASDLHITVGLPPVFRVNGALKTFGDTNLCEDDTRGMLKEILPAPKMEEFVEKGEIDFSYEIPTF
CRFRINAYQQQNHVSIAARMIETKIPAIETLGMPNVLYTLADKPQGLILVTGPTGSGKSTTLASMIDYINTTKSKHIITL
EDPIEYVHTHKKSVINQREVGADTQSFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVMATLHTSSAPTTID
RIIDVFPSHQQGQIRIQLANVLQGIISQRLFVRSDAKGRIAATEILLQIPAVANLIRNEKVHQIQNVMQTSRALGMHTLE
SSIQNLLSSGKISMESAKPFMNVGEY
MKTSIIQLLEKSFQDKASDLHITVGLPPVFRVNGALKTFGDTNLCEDDTRGMLKEILPAPKMEEFVEKGEIDFSYEIPTF
CRFRINAYQQQNHVSIAARMIETKIPAIETLGMPNVLYTLADKPQGLILVTGPTGSGKSTTLASMIDYINTTKSKHIITL
EDPIEYVHTHKKSVINQREVGADTQSFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVMATLHTSSAPTTID
RIIDVFPSHQQGQIRIQLANVLQGIISQRLFVRSDAKGRIAATEILLQIPAVANLIRNEKVHQIQNVMQTSRALGMHTLE
SSIQNLLSSGKISMESAKPFMNVGEY
Nucleotide
Download Length: 1041 bp
>NTDB_id=1044271 ACEPXG_RS11215 WP_391202210.1 2317828..2318868(-) (pilT) [Psychrobacillus sp. L4]
ATGAAAACTTCCATTATCCAATTATTAGAAAAATCTTTTCAAGATAAAGCATCCGATCTTCATATAACAGTTGGACTGCC
TCCTGTATTTCGAGTGAATGGTGCATTAAAAACATTCGGAGATACAAATTTGTGTGAAGATGATACAAGAGGAATGCTAA
AAGAAATCTTACCCGCTCCTAAAATGGAGGAGTTTGTAGAAAAAGGGGAGATTGACTTTAGTTATGAAATACCAACCTTT
TGTCGGTTCCGTATAAATGCTTATCAACAGCAAAATCATGTATCAATAGCTGCACGTATGATTGAAACGAAAATACCAGC
TATTGAGACGCTCGGAATGCCTAATGTACTTTATACATTAGCAGACAAGCCACAAGGTCTTATTTTAGTTACAGGTCCAA
CTGGATCTGGGAAATCAACAACTCTTGCTTCCATGATCGACTATATTAATACAACCAAATCAAAGCATATTATTACATTA
GAAGATCCAATTGAATATGTGCATACCCATAAGAAATCTGTTATCAATCAACGAGAAGTTGGAGCTGATACGCAAAGCTT
TGCTAACGGACTTCGAGCCGCACTTCGCCAAGATCCAGACGTTATATTAGTTGGAGAGATGCGGGATTTAGAAACGATTT
CGACAGCAATTACTGCTGCGGAGACAGGTCATTTAGTAATGGCAACTTTGCATACTAGTAGTGCTCCTACGACGATTGAC
CGGATTATTGATGTATTCCCATCCCATCAACAAGGGCAAATTCGTATTCAATTAGCAAATGTGCTTCAAGGCATCATTTC
GCAACGACTATTTGTTCGAAGTGATGCTAAAGGTCGAATAGCGGCAACTGAAATTTTACTGCAAATACCAGCTGTAGCGA
ATCTTATTCGCAACGAAAAAGTACATCAAATACAAAACGTGATGCAAACGAGTCGAGCGCTTGGTATGCATACACTTGAA
TCATCTATTCAAAATTTACTTTCTTCCGGCAAGATTTCGATGGAATCTGCTAAACCATTTATGAATGTAGGTGAGTATTG
A
ATGAAAACTTCCATTATCCAATTATTAGAAAAATCTTTTCAAGATAAAGCATCCGATCTTCATATAACAGTTGGACTGCC
TCCTGTATTTCGAGTGAATGGTGCATTAAAAACATTCGGAGATACAAATTTGTGTGAAGATGATACAAGAGGAATGCTAA
AAGAAATCTTACCCGCTCCTAAAATGGAGGAGTTTGTAGAAAAAGGGGAGATTGACTTTAGTTATGAAATACCAACCTTT
TGTCGGTTCCGTATAAATGCTTATCAACAGCAAAATCATGTATCAATAGCTGCACGTATGATTGAAACGAAAATACCAGC
TATTGAGACGCTCGGAATGCCTAATGTACTTTATACATTAGCAGACAAGCCACAAGGTCTTATTTTAGTTACAGGTCCAA
CTGGATCTGGGAAATCAACAACTCTTGCTTCCATGATCGACTATATTAATACAACCAAATCAAAGCATATTATTACATTA
GAAGATCCAATTGAATATGTGCATACCCATAAGAAATCTGTTATCAATCAACGAGAAGTTGGAGCTGATACGCAAAGCTT
TGCTAACGGACTTCGAGCCGCACTTCGCCAAGATCCAGACGTTATATTAGTTGGAGAGATGCGGGATTTAGAAACGATTT
CGACAGCAATTACTGCTGCGGAGACAGGTCATTTAGTAATGGCAACTTTGCATACTAGTAGTGCTCCTACGACGATTGAC
CGGATTATTGATGTATTCCCATCCCATCAACAAGGGCAAATTCGTATTCAATTAGCAAATGTGCTTCAAGGCATCATTTC
GCAACGACTATTTGTTCGAAGTGATGCTAAAGGTCGAATAGCGGCAACTGAAATTTTACTGCAAATACCAGCTGTAGCGA
ATCTTATTCGCAACGAAAAAGTACATCAAATACAAAACGTGATGCAAACGAGTCGAGCGCTTGGTATGCATACACTTGAA
TCATCTATTCAAAATTTACTTTCTTCCGGCAAGATTTCGATGGAATCTGCTAAACCATTTATGAATGTAGGTGAGTATTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.941 |
93.353 |
0.494 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50 |
96.532 |
0.483 |
| pilT | Pseudomonas aeruginosa PAK |
49.401 |
96.532 |
0.477 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.401 |
96.532 |
0.477 |
| pilT | Vibrio cholerae strain A1552 |
49.401 |
96.532 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
49.102 |
96.532 |
0.474 |
| pilT | Acinetobacter baumannii D1279779 |
48.802 |
96.532 |
0.471 |
| pilT | Acinetobacter baumannii strain A118 |
48.802 |
96.532 |
0.471 |
| pilT | Acinetobacter baylyi ADP1 |
48.503 |
96.532 |
0.468 |
| pilT | Legionella pneumophila strain ERS1305867 |
47.748 |
96.243 |
0.46 |
| pilT | Legionella pneumophila strain Lp02 |
47.748 |
96.243 |
0.46 |
| pilT | Neisseria meningitidis 8013 |
47.605 |
96.532 |
0.46 |
| pilT | Neisseria gonorrhoeae MS11 |
47.305 |
96.532 |
0.457 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.9 |
95.665 |
0.41 |
| pilU | Vibrio cholerae strain A1552 |
41.994 |
95.665 |
0.402 |
| pilU | Acinetobacter baylyi ADP1 |
41.176 |
93.353 |
0.384 |