Pseudomonas putida KT24401

TA loci of Pseudomonas putida KT2440

Number of TA loci: experimental8; insolico10

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
experimental TA000301 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_5435 (relE) PP_0274 (higA) relE-higA/Xre-RelE
experimental TA000303 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_1199 (higB) PP_1198 (higA) higBA (relBE)/Xre-RelE
experimental TA000307 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_2434 PP_2433 higBA (relBE)/COG5642-COG5654
experimental TA000309 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_2500 (parE) PP_2499 (relB) relB-parE/RHH(antitoxin)
experimental TA000310 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_2939 (yoeB) PP_2940 (yefM) yefM-yoeB (relBE)/PHD-RelE
experimental TA000313 Prophage Pseudomonas putida KT2440 (chromosome) NC_002947 PP_4152 (PP_4152) PP_4151 (PP_4151) PP_4151-4152/MerR-PIN
experimental TA000314 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_4205 (mqsR) PP_4204 (mqsA) mqsRA (relBE)/Xre-YgiU
experimental TA006083 - Pseudomonas putida KT2440 (chromosome) AE015451 PP_1586 (graT) PP_1585 (graA) higBA (relBE)/Xre-RelE
in_silico TA020007 Prophage Pseudomonas putida KT2440 (chromosome) AE015451 PP_3900 (hicA) PP_3899 (hicB) hicAB/-
in_silico TA020564 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS01440 (relE) PP_RS01445 (higA) relE-higA/HigB-HigA
in_silico TA020565 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS06205 (higB) PP_RS06200 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA020566 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS06565 (yhaV) PP_RS06570 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA020567 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS08185 (graT) PP_RS08180 (graA) higBA (relBE)/HigB-HigA
in_silico TA020568 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS12680 PP_RS12675 higBA (relBE)/RES-TIGR02293
in_silico TA020569 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS13055 (parE) PP_RS13050 (relB) relB-parE/RHH(antitoxin)
in_silico TA020570 Prophage Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS20310 (hicA) PP_RS20305 (hicB) hicAB/-
in_silico TA020571 Prophage Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS21570 (PP_4152) PP_RS21565 (PP_4151) PP_4151-4152/excise(antitoxin)
in_silico TA020572 - Pseudomonas putida KT2440 (chromosome) NC_002947 PP_RS21835 (mqsR) PP_RS21830 (mqsA) mqsRA (relBE)/MqsR-MqsA
experimentalExperimentally validated     insolicoBioinformatically predicted