NZ_CP009041304700..409892

MGE detailed information

MGE type: Genomic_island        MGE length: 105193 bp
Accession: NZ_CP009041        Location: 304700..409892         Organism: Vibrio cholerae O1 biovar El Tor strain FJ147       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IR04_RS01290 () 300473..301624 + 1152 WP_001018595.1 site-specific integrase -
IR04_RS01295 () 301670..302650 + 981 WP_000019370.1 IS5-like element ISVch5 family transposase -
IR04_RS20370 () 302926..304179 + 1254 WP_012725034.1 hypothetical protein -
IR04_RS01305 () 304700..305230 + 531 WP_000237645.1 type VI secretion system PAAR protein -
IR04_RS01310 () 305230..305901 + 672 WP_000132861.1 hypothetical protein -
IR04_RS20305 () 306026..306253 + 228 WP_001911595.1 hypothetical protein -
IR04_RS01320 () 306522..308450 + 1929 WP_001121779.1 threonine--tRNA ligase -
IR04_RS01325 () 308454..309005 + 552 WP_001894072.1 translation initiation factor IF-3 -
IR04_RS01330 () 309109..309303 + 195 WP_001885060.1 50S ribosomal protein L35 -
IR04_RS01335 () 309345..309698 + 354 WP_001138366.1 50S ribosomal protein L20 -
IR04_RS01340 () 309780..310742 - 963 WP_000841995.1 IS91 family transposase ISAzo26 Transposase
IR04_RS19130 () 311222..311389 + 168 WP_001883086.1 DUF3265 domain-containing protein -
IR04_RS01345 () 311418..311744 + 327 WP_001921550.1 hypothetical protein -
IR04_RS20375 () 311788..311877 + 90 WP_072615218.1 DUF3265 domain-containing protein -
IR04_RS01355 () 312541..312723 + 183 WP_000923182.1 DUF645 family protein -
IR04_RS01360 () 312979..313230 + 252 WP_001890111.1 TIGR03643 family protein -
IR04_RS19145 () 313203..313352 + 150 WP_071908333.1 DUF3265 domain-containing protein -
IR04_RS01365 () 313383..313814 + 432 WP_000795498.1 hypothetical protein -
IR04_RS01370 () 313965..314594 + 630 WP_001009012.1 Chloramphenicol acetyltransferase VF
IR04_RS01375 () 314750..315502 + 753 WP_000116045.1 putative oxidoreductase YgfF VF
IR04_RS19150 () 315600..315779 + 180 WP_001203705.1 hypothetical protein -
IR04_RS01380 () 315804..315986 + 183 WP_000923334.1 DUF645 family protein -
IR04_RS01385 () 316191..316568 + 378 WP_000411106.1 hypothetical protein -
IR04_RS01390 () 316864..317046 + 183 WP_000923340.1 DUF645 family protein -
IR04_RS01400 () 317400..317582 + 183 WP_000923153.1 DUF645 family protein -
IR04_RS01405 () 317777..318454 + 678 WP_000254617.1 HNH endonuclease -
IR04_RS01410 () 318616..319824 + 1209 WP_000272282.1 deoxyguanosinetriphosphate triphosphohydrolase family protein -
IR04_RS01415 () 319986..320690 + 705 WP_000087610.1 HNH endonuclease -
IR04_RS01420 () 320848..321186 + 339 WP_000713853.1 hypothetical protein -
IR04_RS01425 () 321340..321657 - 318 WP_001180243.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01430 () 321676..321918 - 243 WP_000557292.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
IR04_RS01435 () 322162..322548 + 387 WP_001015867.1 NUDIX hydrolase -
IR04_RS19160 () 322605..322718 + 114 WP_001900214.1 hypothetical protein -
IR04_RS01440 () 322667..322948 + 282 WP_001894429.1 DUF1289 domain-containing protein -
IR04_RS01450 () 323206..323742 + 537 WP_000469482.1 GNAT family N-acetyltransferase -
IR04_RS01455 () 323879..324394 + 516 WP_001201509.1 lipocalin family protein -
IR04_RS01460 () 324544..325041 - 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
IR04_RS01465 () 325038..325310 - 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
IR04_RS19885 () 325703..325828 + 126 WP_001900195.1 DUF645 family protein -
IR04_RS19890 () 325844..325882 + 39 WP_106019118.1 hypothetical protein -
IR04_RS01475 () 326078..326524 + 447 WP_000006157.1 hypothetical protein -
IR04_RS01480 () 326672..326941 - 270 WP_000277238.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
IR04_RS01485 () 326934..327212 - 279 WP_001258569.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
IR04_RS19175 () 327498..327776 + 279 WP_001921601.1 DUF3709 domain-containing protein -
IR04_RS19905 () 328028..328234 + 207 Protein_290 DUF3709 domain-containing protein -
IR04_RS19910 () 328434..328535 + 102 WP_001921603.1 hypothetical protein -
IR04_RS01495 () 328525..328911 + 387 WP_000703163.1 VOC family protein -
IR04_RS01500 () 329106..329357 + 252 WP_001890111.1 TIGR03643 family protein -
IR04_RS19185 () 329330..329479 + 150 WP_071908333.1 DUF3265 domain-containing protein -
IR04_RS01505 () 329571..329813 + 243 WP_000107461.1 hypothetical protein -
IR04_RS01510 () 330065..330343 + 279 WP_000280324.1 DUF3709 domain-containing protein -
IR04_RS20380 () 330718..330861 + 144 Protein_297 DUF645 family protein -
IR04_RS20385 () 330915..330953 + 39 WP_082798268.1 hypothetical protein -
IR04_RS01515 () 331165..331632 + 468 WP_001289288.1 OsmC family protein -
IR04_RS01520 () 331760..332422 + 663 WP_000960654.1 hypothetical protein -
IR04_RS01525 () 332607..332873 + 267 WP_000589156.1 BrnT family toxin Toxin Detail
IR04_RS01530 () 332860..333105 + 246 WP_000643598.1 hypothetical protein Antitoxin Detail
IR04_RS01535 () 333201..333995 + 795 WP_001911581.1 hypothetical protein -
IR04_RS20390 () 334098..334226 + 129 WP_071908338.1 general secretion pathway protein GspI -
IR04_RS01540 () 334287..334469 + 183 WP_000923182.1 DUF645 family protein -
IR04_RS01545 () 334685..335689 + 1005 WP_000964920.1 LD-carboxypeptidase -
IR04_RS01550 () 335842..336201 + 360 WP_001071541.1 VOC family protein -
IR04_RS01555 () 336474..336707 + 234 WP_001890112.1 DUF3709 domain-containing protein -
IR04_RS01560 () 336975..337481 + 507 WP_000393074.1 hypothetical protein -
IR04_RS01565 () 337638..338024 + 387 WP_000703163.1 VOC family protein -
IR04_RS01570 () 338281..338484 + 204 WP_001911580.1 hypothetical protein -
IR04_RS01575 () 338679..338930 + 252 WP_001890111.1 TIGR03643 family protein -
IR04_RS19225 () 338903..339052 + 150 WP_071908333.1 DUF3265 domain-containing protein -
IR04_RS01580 () 339199..339624 + 426 WP_000415750.1 hypothetical protein -
IR04_RS01585 () 339830..340453 + 624 WP_000247070.1 DUF1349 domain-containing protein -
IR04_RS01590 () 340666..341145 + 480 WP_000009888.1 lecithin retinol acyltransferase family protein -
IR04_RS01595 () 341333..341746 + 414 WP_000049420.1 VOC family protein -
IR04_RS01600 () 341897..342175 - 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
IR04_RS01605 () 342172..342456 - 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
IR04_RS01610 () 342651..343166 + 516 WP_001201520.1 lipocalin family protein -
IR04_RS01615 () 343231..343827 + 597 WP_000255434.1 hypothetical protein -
IR04_RS01620 () 344219..344401 + 183 WP_000923182.1 DUF645 family protein -
IR04_RS01625 () 344601..345074 + 474 WP_001161076.1 GrpB family protein -
IR04_RS19240 () 345089..345181 + 93 WP_014378730.1 DUF3265 domain-containing protein -
IR04_RS01630 () 345223..345849 + 627 WP_000365424.1 LysE family translocator -
IR04_RS01635 () 345972..346670 + 699 WP_001890502.1 hypothetical protein -
IR04_RS19245 () 346680..346790 + 111 WP_079857360.1 DUF3265 domain-containing protein -
IR04_RS01645 () 347368..347547 + 180 WP_001883058.1 DUF645 family protein -
IR04_RS01650 () 347761..348156 + 396 WP_000870857.1 DUF3465 domain-containing protein -
IR04_RS01655 () 348284..348583 - 300 WP_000802136.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01660 () 348580..348822 - 243 WP_001107719.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
IR04_RS19055 () 349051..349629 + 579 WP_000110120.1 hypothetical protein -
IR04_RS19255 () 349651..349743 + 93 WP_014164112.1 DUF3265 domain-containing protein -
IR04_RS01675 () 350167..350850 + 684 WP_000877436.1 hypothetical protein -
IR04_RS01680 () 351064..351330 + 267 WP_000937852.1 hypothetical protein -
IR04_RS01685 () 351485..352084 + 600 WP_000429495.1 hypothetical protein -
IR04_RS01690 () 352365..353300 + 936 WP_000051985.1 restriction endonuclease -
IR04_RS19270 () 353266..353406 + 141 WP_001883049.1 DUF3265 domain-containing protein -
IR04_RS01695 () 353518..354540 + 1023 WP_000954291.1 hypothetical protein -
IR04_RS01700 () 354581..355087 + 507 WP_001921103.1 hypothetical protein -
IR04_RS01705 () 355148..355843 - 696 WP_000213836.1 hypothetical protein -
IR04_RS01720 () 357435..358442 + 1008 WP_000093800.1 DUF4365 domain-containing protein -
IR04_RS19960 () 358439..358549 + 111 Protein_344 DUF3265 domain-containing protein -
IR04_RS01725 () 358667..358945 + 279 WP_000280319.1 DUF3709 domain-containing protein -
IR04_RS01730 () 359198..359593 + 396 WP_000046952.1 hypothetical protein -
IR04_RS19280 () 359896..360077 + 182 Protein_347 DUF645 family protein -
IR04_RS01735 () 360254..360649 + 396 WP_000046953.1 hypothetical protein -
IR04_RS01740 () 360793..361329 + 537 WP_000644491.1 nucleotidyltransferase family protein -
IR04_RS01750 () 361626..361805 + 180 WP_001883039.1 DUF645 family protein -
IR04_RS01755 () 362001..362426 + 426 WP_000403014.1 GNAT family N-acetyltransferase -
IR04_RS01760 () 362575..362922 + 348 WP_000933409.1 hypothetical protein -
IR04_RS20205 () 363069..363362 + 294 WP_125460920.1 hypothetical protein -
IR04_RS20395 () 363718..363813 + 96 WP_001907607.1 DUF645 family protein -
IR04_RS01765 () 364007..364324 - 318 WP_001180243.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01770 () 364343..364585 - 243 WP_000557292.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
IR04_RS01775 () 364827..365336 + 510 WP_000405987.1 GNAT family N-acetyltransferase -
IR04_RS01780 () 365393..366046 + 654 WP_000226874.1 hypothetical protein -
IR04_RS01785 () 366356..366574 + 219 WP_001917086.1 DUF3709 domain-containing protein -
IR04_RS19310 () 366977..367210 + 234 WP_032482776.1 DUF3709 domain-containing protein -
IR04_RS01790 () 367635..367815 + 181 Protein_361 DUF645 family protein -
IR04_RS01795 () 368082..368369 + 288 WP_001162670.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01800 () 368380..368697 + 318 WP_001232701.1 HigA family addiction module antidote protein Antitoxin Detail
IR04_RS20400 () 368694..368804 + 111 WP_134814058.1 DUF3265 domain-containing protein -
IR04_RS20405 () 368981..369106 + 126 WP_001944767.1 DUF645 family protein -
IR04_RS20410 () 369122..369160 + 39 WP_106019119.1 hypothetical protein -
IR04_RS01805 () 369373..370377 + 1005 WP_000964925.1 LD-carboxypeptidase -
IR04_RS01810 () 370530..370976 + 447 WP_000128977.1 hypothetical protein -
IR04_RS01815 () 371096..372025 + 930 WP_000335802.1 hypothetical protein -
IR04_RS19990 () 372022..372132 + 111 WP_071917832.1 DUF3265 domain-containing protein -
IR04_RS01820 () 372160..372636 + 477 WP_001047180.1 GNAT family N-acetyltransferase -
IR04_RS01825 () 372773..373288 + 516 WP_001201528.1 lipocalin family protein -
IR04_RS01830 () 373424..373714 - 291 WP_000221352.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01835 () 373704..373952 - 249 WP_000213183.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
IR04_RS01850 () 374523..375176 + 654 WP_000036957.1 site-specific DNA-methyltransferase -
IR04_RS01855 () 375448..375873 + 426 WP_000415748.1 hypothetical protein -
IR04_RS01860 () 376081..376476 + 396 WP_000649527.1 DUF3465 domain-containing protein -
IR04_RS01865 () 376627..377157 + 531 WP_000415563.1 hypothetical protein -
IR04_RS01870 () 377295..377795 + 501 WP_000789723.1 hypothetical protein -
IR04_RS01875 () 377951..378349 + 399 WP_001882293.1 hypothetical protein -
IR04_RS01880 () 378449..378913 - 465 WP_000140244.1 hypothetical protein -
IR04_RS01885 () 379296..380281 - 986 Protein_382 Sulfate-binding protein VF
IR04_RS01890 () 380532..381110 + 579 WP_001020575.1 DJ-1/PfpI family protein -
IR04_RS19345 () 381414..381584 + 171 WP_001882300.1 DUF645 family protein -
IR04_RS01895 () 381907..382521 + 615 WP_000789575.1 hypothetical protein -
IR04_RS01900 () 382668..383525 + 858 WP_001279526.1 DUF2806 domain-containing protein -
IR04_RS01905 () 383681..384232 + 552 WP_000821930.1 hypothetical protein -
IR04_RS20315 () 384519..384722 + 204 WP_001911745.1 hypothetical protein -
IR04_RS20015 () 385003..385176 + 174 WP_001882305.1 DUF3709 domain-containing protein -
IR04_RS01915 () 385536..385805 + 270 WP_001198131.1 hypothetical protein -
IR04_RS19360 () 386123..386294 + 172 Protein_391 DUF645 family protein -
IR04_RS01920 () 386503..386889 + 387 WP_000703163.1 VOC family protein -
IR04_RS01925 () 387091..387333 + 243 WP_000107461.1 hypothetical protein -
IR04_RS01930 () 387504..387881 + 378 WP_000411109.1 hypothetical protein -
IR04_RS20415 () 387938..388052 + 115 Protein_395 acetyltransferase -
IR04_RS19365 () 388001..388282 + 282 WP_001894453.1 DUF1289 domain-containing protein -
IR04_RS19380 () 388448..388561 + 114 WP_001889158.1 hypothetical protein -
IR04_RS19385 () 388510..388737 + 228 WP_073426587.1 DUF1289 domain-containing protein -
IR04_RS01940 () 389078..389410 + 333 WP_000843587.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01945 () 389397..389711 + 315 WP_000071008.1 DNA-binding transcriptional regulator Antitoxin Detail
IR04_RS01950 () 389848..390282 + 435 WP_000256036.1 GNAT family N-acetyltransferase -
IR04_RS20250 () 390450..390605 + 156 WP_000751734.1 hypothetical protein -
IR04_RS01960 () 390730..391710 - 981 WP_000019370.1 IS5 family transposase ISVch5 Transposase
IR04_RS01965 () 391778..392050 + 273 Protein_404 Streptogramin A acetyltransferase VF
IR04_RS01970 () 392221..392913 + 693 WP_001047169.1 GNAT family N-acetyltransferase Antitoxin Detail
IR04_RS01975 () 392913..393314 + 402 WP_000351248.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
IR04_RS20025 () 393284..393427 + 144 WP_071908341.1 DUF3265 domain-containing protein -
IR04_RS01980 () 393502..393915 + 414 WP_000049417.1 VOC family protein -
IR04_RS01985 () 394129..394380 + 252 WP_001250179.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
IR04_RS01990 () 394370..394657 + 288 WP_000221354.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS01995 () 394785..395240 + 456 WP_001245327.1 GNAT family N-acetyltransferase -
IR04_RS02000 () 395562..395714 + 153 WP_001884520.1 DUF645 family protein -
IR04_RS02005 () 395916..396413 - 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
IR04_RS02010 () 396410..396682 - 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
IR04_RS02015 () 396913..397581 + 669 WP_000043871.1 hypothetical protein -
IR04_RS02020 () 397733..398020 + 288 WP_000426470.1 hypothetical protein -
IR04_RS02025 () 398161..398532 + 372 WP_001164080.1 nucleotide pyrophosphohydrolase -
IR04_RS02030 () 398599..399024 + 426 WP_001882332.1 DUF1778 domain-containing protein Antitoxin Detail
IR04_RS02035 () 399021..399554 + 534 WP_000118351.1 GNAT family N-acetyltransferase Toxin Detail
IR04_RS02040 () 399756..400013 + 258 WP_000861987.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
IR04_RS02045 () 400001..400303 + 303 WP_000229317.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IR04_RS02050 () 400537..401454 + 918 WP_000186333.1 alpha/beta hydrolase -
IR04_RS02055 () 401611..402000 + 390 WP_001081302.1 hypothetical protein -
IR04_RS02060 () 402136..402345 + 210 Protein_424 GNAT family N-acetyltransferase -
IR04_RS02065 () 402464..402901 + 438 WP_000503169.1 IS200-IS605 family transposase IS1004 Transposase
IR04_RS02070 () 402965..403183 + 219 WP_071908318.1 GNAT family N-acetyltransferase -
IR04_RS02075 () 403358..404230 + 873 WP_000254716.1 DUF3800 domain-containing protein -
IR04_RS02080 () 404380..404979 + 600 WP_001891245.1 glutathione S-transferase N-terminal domain-containing protein -
IR04_RS20045 () 405036..405140 + 105 WP_099607150.1 acetyltransferase Antitoxin Detail
IR04_RS02085 () 405171..405440 + 270 WP_001114075.1 DUF4160 domain-containing protein Toxin Detail
IR04_RS02090 () 405434..405955 + 522 WP_000921691.1 DUF2442 domain-containing protein Antitoxin Detail
IR04_RS20050 () 406254..406379 + 126 WP_001905700.1 DUF645 family protein -
IR04_RS02095 () 406630..407025 + 396 WP_001000867.1 hypothetical protein -
IR04_RS02100 () 407164..407442 - 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
IR04_RS02105 () 407439..407723 - 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
IR04_RS02110 () 407917..408432 + 516 WP_000343779.1 dTDP-fucosamine acetyltransferase VF
IR04_RS02115 () 408616..409029 + 414 WP_000049420.1 VOC family protein -
IR04_RS02125 () 409584..410761 + 1178 WP_086010879.1 IS3-like element ISVch4 family transposase -
IR04_RS02130 () 411180..413957 + 2778 WP_000509636.1 alkaline phosphatase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance