Pseudomonas syringae


experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0148 experimental PSYR_RS19090 (relA) T6SS00086 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 4380642..4382885 (-) 499587809 T6SS transcripts (↓)
REG0149 experimental PSYR_RS01070 (spoT) T6SS00086 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 223004..225109 (-) 489499092 T6SS transcripts (↓)
REG0150 experimental Psyr_3698 (gacS) T6SS00086 experimental protein TCS-HK Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 4385550..4388303 (+) 499587812 T6SS transcription (↓)
REG0151 experimental Psyr_4339 (ladS) T6SS00086 experimental protein QS regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5191591..5193585 (-) 639463044 T6SS transcription (↓)
REG0152 experimental Psyr_4408 (retS) T6SS00086 experimental protein QS regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5270882..5273671 (+) 489494774 T6SS transcription (↑)

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Effector ID Locus tag (Gene) Classification Cognate immunity protein Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID
EFF00961 experimental PSYR_RS25780 - - T6SS00086 experimental Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5889737..5890255 (+) 66048189

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Immunity protein ID Locus tag (Gene) Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Cognate effector

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
ID           Locus tag (Gene) Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Response to T6SS attack Known or putative function

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Accessory protein ID Locus tag (Gene) Related T6SS Type             Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Related structure protein Related effector