Aliivibrio
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS00084 | i1 | Aliivibrio fischeri ES114 | chromosome I (NC_006840) | 1087244..1118010 | anti-bacterial |
| T6SS01277 | i1 | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000002) | 747470..766109 | anti-bacterial |
| T6SS01278 | i1 | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000004) | 316834..358016 | anti-bacterial |
| T6SS01284 | Unknown | Vibrio fischeri FQ-A002 | chromosome (-) | - | anti-bacterial |
| T6SS01285 | Unknown | Vibrio fischeri EBS004 | chromosome (-) | - | anti-bacterial |
| T6SS01286 | Unknown | Vibrio fischeri EBS004 | chromosome (-) | - | anti-bacterial |
| T6SS17506 | i1 | Aliivibrio fischeri strain ES401 | chromosome (NZ_SRJG01000005) | 345059..392876 | anti-bacterial |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0122 |
VF2177 (LitR) | T6SS00084 |
protein | QS regulatory pathway | Aliivibrio fischeri ES114 | chromosome (NC_006840) | 2446537..2447142 (+) | 59712784 | Unknown (↓) |
| REG0123 |
VF0896 (TfoX) | T6SS00084 |
protein | Global regulator | Aliivibrio fischeri ES114 | chromosome (NC_006840) | 986000..986629 (+) | 59711503 | T6SS transcripts (↓) |
| REG0124 |
VFFQA001_02105 (rpoN) | T6SS01277 |
protein | Global regulator | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000002) | 62995..64464 (-) | 501526930 | hcp1/hcp transcript (↓) |
| REG0125 |
VFFQA001_15620 (VasH) | T6SS01278 |
protein | Global regulator | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000004) | 359608..360108 (+) | 1027725198 | Unknown (↓) |
| REG0371 |
VFES401_RS15770 (tasR) | T6SS17506 |
protein | Unknown | Aliivibrio fischeri strain ES401 | chromosome (NZ_SRJG01000005) | 373862..374311 (+) | WP_012535053.1 | hcp promotor (↓) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
|---|
Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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