Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NST88_RS12675 | Genome accession | NZ_CP150162 |
| Coordinates | 2467358..2468428 (-) | Length | 356 a.a. |
| NCBI ID | WP_004399124.1 | Uniprot ID | A0A809FNW6 |
| Organism | Bacillus sp. PS68 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2462358..2473428
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST88_RS12630 (NST88_12630) | tapA | 2462837..2463598 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST88_RS12635 (NST88_12635) | - | 2463870..2464196 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NST88_RS12640 (NST88_12640) | - | 2464238..2464417 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| NST88_RS12645 (NST88_12645) | comGG | 2464488..2464862 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| NST88_RS12650 (NST88_12650) | comGF | 2464863..2465246 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| NST88_RS12655 (NST88_12655) | comGE | 2465272..2465619 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| NST88_RS12660 (NST88_12660) | comGD | 2465603..2466034 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| NST88_RS12665 (NST88_12665) | comGC | 2466024..2466320 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NST88_RS12670 (NST88_12670) | comGB | 2466334..2467371 (-) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| NST88_RS12675 (NST88_12675) | comGA | 2467358..2468428 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NST88_RS12680 (NST88_12680) | corA | 2468840..2469793 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NST88_RS12685 (NST88_12685) | - | 2469936..2471264 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| NST88_RS12690 (NST88_12690) | rsbRD | 2471317..2472153 (-) | 837 | WP_004398754.1 | RsbT co-antagonist protein RsbRD | - |
| NST88_RS12700 (NST88_12700) | mgsR | 2472377..2472757 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NST88_RS12705 (NST88_12705) | - | 2472989..2473234 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=964241 NST88_RS12675 WP_004399124.1 2467358..2468428(-) (comGA) [Bacillus sp. PS68]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=964241 NST88_RS12675 WP_004399124.1 2467358..2468428(-) (comGA) [Bacillus sp. PS68]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGTTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGTTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |