Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | VQZ30_RS20670 | Genome accession | NZ_CP142375 |
| Coordinates | 4341520..4342623 (+) | Length | 367 a.a. |
| NCBI ID | WP_045358353.1 | Uniprot ID | A0A0A1VTA3 |
| Organism | Microcystis aeruginosa 1339 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4336520..4347623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VQZ30_RS20660 (VQZ30_20660) | - | 4336923..4338845 (+) | 1923 | WP_045358351.1 | S9 family peptidase | - |
| VQZ30_RS20665 (VQZ30_20665) | pilB/pilB1 | 4339331..4341346 (+) | 2016 | WP_045358352.1 | GspE/PulE family protein | Machinery gene |
| VQZ30_RS20670 (VQZ30_20670) | pilT | 4341520..4342623 (+) | 1104 | WP_045358353.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| VQZ30_RS20675 (VQZ30_20675) | - | 4342811..4344025 (+) | 1215 | WP_045358354.1 | type II secretion system F family protein | - |
| VQZ30_RS20680 (VQZ30_20680) | - | 4344188..4344809 (+) | 622 | Protein_4092 | ISKra4 family transposase | - |
| VQZ30_RS20685 (VQZ30_20685) | - | 4345180..4346121 (+) | 942 | Protein_4093 | ISKra4 family transposase | - |
| VQZ30_RS20690 (VQZ30_20690) | - | 4346664..4346954 (+) | 291 | WP_341853617.1 | hypothetical protein | - |
| VQZ30_RS20695 (VQZ30_20695) | - | 4346954..4347469 (-) | 516 | Protein_4095 | serine/threonine-protein kinase pkn1 | - |
Sequence
Protein
Download Length: 367 a.a. Molecular weight: 40391.50 Da Isoelectric Point: 7.3537
>NTDB_id=925541 VQZ30_RS20670 WP_045358353.1 4341520..4342623(+) (pilT) [Microcystis aeruginosa 1339]
MEMIEDLMQQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQRLIFSMLNNTQRKELEQNWELDCSYGVKGLA
RFRVNVYKERGAYAACLRALSSKIPNFEQLNLPEVVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTVE
DPIEYVFSNIKSLFHQRQKGEDTKSFANALKSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVDR
IIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGMQ
TMEQGLANLVVSGVVSFEEAISKSGKPDELQRLVAGASANVKTKARL
MEMIEDLMQQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQRLIFSMLNNTQRKELEQNWELDCSYGVKGLA
RFRVNVYKERGAYAACLRALSSKIPNFEQLNLPEVVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTVE
DPIEYVFSNIKSLFHQRQKGEDTKSFANALKSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVDR
IIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGMQ
TMEQGLANLVVSGVVSFEEAISKSGKPDELQRLVAGASANVKTKARL
Nucleotide
Download Length: 1104 bp
>NTDB_id=925541 VQZ30_RS20670 WP_045358353.1 4341520..4342623(+) (pilT) [Microcystis aeruginosa 1339]
ATGGAAATGATCGAAGATTTAATGCAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCGCCGGT
CTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAGATTGATTTTTA
GTATGCTCAATAATACTCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTAAAAGGATTAGCA
AGATTTAGGGTCAATGTTTATAAAGAAAGGGGTGCTTATGCAGCTTGTTTACGCGCTTTGTCCTCCAAAATTCCTAACTT
TGAACAATTAAATTTACCAGAAGTAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGCCAAACAG
GTTCAGGAAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTCGTTCCGAGCATATTTTAACGGTAGAA
GACCCAATTGAATACGTTTTTTCTAATATAAAAAGCTTGTTTCACCAAAGACAAAAGGGAGAAGATACCAAGAGTTTTGC
TAACGCATTAAAATCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTAGTT
TGGCAATCACGGCTGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGATCGG
ATTATTGACGTTTTTCCTGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTCTACTAGCAGTTTTTAGTCA
AAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTCCAG
CGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGTTAGGAATGCAA
ACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTGTCTCCTTTGAAGAAGCAATTTCTAAAAGTGGTAAACC
CGATGAATTACAACGTCTTGTCGCTGGGGCCAGCGCTAATGTTAAAACTAAAGCCAGGCTCTAA
ATGGAAATGATCGAAGATTTAATGCAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCGCCGGT
CTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAGATTGATTTTTA
GTATGCTCAATAATACTCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTAAAAGGATTAGCA
AGATTTAGGGTCAATGTTTATAAAGAAAGGGGTGCTTATGCAGCTTGTTTACGCGCTTTGTCCTCCAAAATTCCTAACTT
TGAACAATTAAATTTACCAGAAGTAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGCCAAACAG
GTTCAGGAAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTCGTTCCGAGCATATTTTAACGGTAGAA
GACCCAATTGAATACGTTTTTTCTAATATAAAAAGCTTGTTTCACCAAAGACAAAAGGGAGAAGATACCAAGAGTTTTGC
TAACGCATTAAAATCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTAGTT
TGGCAATCACGGCTGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGATCGG
ATTATTGACGTTTTTCCTGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTCTACTAGCAGTTTTTAGTCA
AAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTCCAG
CGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGTTAGGAATGCAA
ACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTGTCTCCTTTGAAGAAGCAATTTCTAAAAGTGGTAAACC
CGATGAATTACAACGTCTTGTCGCTGGGGCCAGCGCTAATGTTAAAACTAAAGCCAGGCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
52.174 |
94.005 |
0.49 |
| pilT | Legionella pneumophila strain Lp02 |
52.174 |
94.005 |
0.49 |
| pilT | Pseudomonas aeruginosa PAK |
51.873 |
94.55 |
0.49 |
| pilT | Acinetobacter baumannii D1279779 |
51.297 |
94.55 |
0.485 |
| pilT | Acinetobacter baumannii strain A118 |
51.297 |
94.55 |
0.485 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
94.55 |
0.485 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.009 |
94.55 |
0.482 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.471 |
92.643 |
0.477 |
| pilT | Vibrio cholerae strain A1552 |
51.471 |
92.643 |
0.477 |
| pilT | Acinetobacter baylyi ADP1 |
50.432 |
94.55 |
0.477 |
| pilT | Neisseria gonorrhoeae MS11 |
49.852 |
91.826 |
0.458 |
| pilT | Neisseria meningitidis 8013 |
49.852 |
91.826 |
0.458 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.413 |
97.548 |
0.433 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.462 |
95.64 |
0.368 |