Detailed information NTG0887058

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: RSK81_RS11555
• Genome accession: NZ_CP135591
• Coordinates: 2336094..2336411 (-)
• Length: 105 a.a.
• NCBI ID: WP_002927120.1
• Uniprot ID: A0AA96NS04
• Organism: Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2331094..2341411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RSK81_RS11520 (RSK81_11520)	-	2331478..2332227 (-)	750	WP_061595031.1	CPBP family intramembrane glutamic endopeptidase	-
RSK81_RS11525 (RSK81_11525)	-	2332370..2333563 (-)	1194	WP_002911070.1	acetate kinase	-
RSK81_RS11530 (RSK81_11530)	comYH	2333600..2334565 (-)	966	WP_314831042.1	class I SAM-dependent methyltransferase	Machinery gene
RSK81_RS11535 (RSK81_11535)	comGG	2334647..2335039 (-)	393	WP_048771947.1	competence type IV pilus minor pilin ComGG	-
RSK81_RS11540 (RSK81_11540)	comGF/cglF	2335020..2335457 (-)	438	WP_002927109.1	competence type IV pilus minor pilin ComGF	Machinery gene
RSK81_RS11545 (RSK81_11545)	comGE/cglE	2335441..2335734 (-)	294	WP_002911065.1	competence type IV pilus minor pilin ComGE	Machinery gene
RSK81_RS11550 (RSK81_11550)	comYD	2335700..2336134 (-)	435	WP_002934686.1	competence type IV pilus minor pilin ComGD	Machinery gene
RSK81_RS11555 (RSK81_11555)	comYC	2336094..2336411 (-)	318	WP_002927120.1	competence type IV pilus major pilin ComGC	Machinery gene
RSK81_RS11560 (RSK81_11560)	comYB	2336411..2337445 (-)	1035	WP_260469178.1	competence type IV pilus assembly protein ComGB	Machinery gene
RSK81_RS11565 (RSK81_11565)	comYA	2337375..2338316 (-)	942	WP_315686885.1	competence type IV pilus ATPase ComGA	Machinery gene
RSK81_RS11570 (RSK81_11570)	-	2338446..2338826 (-)	381	WP_002901723.1	DUF1033 family protein	-
RSK81_RS11575 (RSK81_11575)	-	2339145..2340251 (-)	1107	WP_002923025.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11427.35 Da
• Isoelectric Point: 9.9006

>NTDB_id=887058 RSK81_RS11555 WP_002927120.1 2336094..2336411(-) (comYC) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MKKLNKLKVQAFTLVEMLIVLLVISVLLLLFVPNLTKQKDAVSDTGTAAVVKVVESQAELYELKNTNEKASLSKLVSAGN
ISQKQADSYKAYYGKHSGETQAVAN

Nucleotide

• Length: 318 bp

>NTDB_id=887058 RSK81_RS11555 WP_002927120.1 2336094..2336411(-) (comYC) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGAAAAAACTTAATAAATTGAAGGTTCAAGCATTCACCCTTGTGGAAATGCTGATTGTCTTGCTGGTTATCAGCGTACT
CTTGCTGCTCTTTGTGCCTAATCTGACCAAGCAAAAAGATGCTGTTTCAGATACAGGAACTGCAGCGGTGGTCAAGGTGG
TAGAAAGCCAGGCAGAGCTGTATGAATTGAAGAATACCAATGAAAAGGCTAGCCTGAGCAAGCTAGTCAGCGCAGGAAAT
ATCAGCCAGAAGCAGGCAGATTCATATAAGGCTTACTATGGAAAACACAGTGGCGAAACTCAAGCAGTTGCCAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	83.81	100	0.838
comYC	Streptococcus mutans UA159	68.571	100	0.686
comYC	Streptococcus mutans UA140	68.571	100	0.686
comGC/cglC	Streptococcus mitis NCTC 12261	67.647	97.143	0.657
comGC/cglC	Streptococcus mitis SK321	68	95.238	0.648
comGC/cglC	Streptococcus pneumoniae Rx1	66	95.238	0.629
comGC/cglC	Streptococcus pneumoniae D39	66	95.238	0.629
comGC/cglC	Streptococcus pneumoniae TIGR4	66	95.238	0.629
comGC/cglC	Streptococcus pneumoniae R6	66	95.238	0.629
comGC	Lactococcus lactis subsp. cremoris KW2	59	95.238	0.562
comYC	Streptococcus suis isolate S10	61.798	84.762	0.524
comGC	Staphylococcus aureus MW2	43.878	93.333	0.41
comGC	Staphylococcus aureus N315	43.878	93.333	0.41