Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | RSK81_RS11530 | Genome accession | NZ_CP135591 |
| Coordinates | 2333600..2334565 (-) | Length | 321 a.a. |
| NCBI ID | WP_314831042.1 | Uniprot ID | - |
| Organism | Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2328600..2339565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RSK81_RS11510 (RSK81_11510) | folP | 2329574..2330527 (-) | 954 | WP_315686880.1 | dihydropteroate synthase | - |
| RSK81_RS11515 (RSK81_11515) | - | 2330722..2331360 (-) | 639 | WP_061595030.1 | hypothetical protein | - |
| RSK81_RS11520 (RSK81_11520) | - | 2331478..2332227 (-) | 750 | WP_061595031.1 | CPBP family intramembrane glutamic endopeptidase | - |
| RSK81_RS11525 (RSK81_11525) | - | 2332370..2333563 (-) | 1194 | WP_002911070.1 | acetate kinase | - |
| RSK81_RS11530 (RSK81_11530) | comYH | 2333600..2334565 (-) | 966 | WP_314831042.1 | class I SAM-dependent methyltransferase | Machinery gene |
| RSK81_RS11535 (RSK81_11535) | comGG | 2334647..2335039 (-) | 393 | WP_048771947.1 | competence type IV pilus minor pilin ComGG | - |
| RSK81_RS11540 (RSK81_11540) | comGF/cglF | 2335020..2335457 (-) | 438 | WP_002927109.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RSK81_RS11545 (RSK81_11545) | comGE/cglE | 2335441..2335734 (-) | 294 | WP_002911065.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| RSK81_RS11550 (RSK81_11550) | comYD | 2335700..2336134 (-) | 435 | WP_002934686.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RSK81_RS11555 (RSK81_11555) | comYC | 2336094..2336411 (-) | 318 | WP_002927120.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RSK81_RS11560 (RSK81_11560) | comYB | 2336411..2337445 (-) | 1035 | WP_260469178.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RSK81_RS11565 (RSK81_11565) | comYA | 2337375..2338316 (-) | 942 | WP_315686885.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RSK81_RS11570 (RSK81_11570) | - | 2338446..2338826 (-) | 381 | WP_002901723.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 321 a.a. Molecular weight: 36687.68 Da Isoelectric Point: 4.6225
>NTDB_id=887054 RSK81_RS11530 WP_314831042.1 2333600..2334565(-) (comYH) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MNFEKIEQAYTLILENVQNIQNTLATNFYDALIEQNGIYLDGDTDLQEVLANDEKIRALHLTKEEWRRAYQFILMKAAQT
EPMQVNHQFTPDTIGFLITFLLDQLAHGEEADVLEIGSGTGNLAETILNHTQKKIDYLGLELDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDIIISDLPVGYYPDDSIASRYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNDLLTSAQ
APLLKKWLLAKAQFIAMITLPESIFSSSKHAKTLFVLRKQEANNIQPFIYPLRDLQDHEEMFKFRQSFQNWYKDSEIQTK
F
MNFEKIEQAYTLILENVQNIQNTLATNFYDALIEQNGIYLDGDTDLQEVLANDEKIRALHLTKEEWRRAYQFILMKAAQT
EPMQVNHQFTPDTIGFLITFLLDQLAHGEEADVLEIGSGTGNLAETILNHTQKKIDYLGLELDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDIIISDLPVGYYPDDSIASRYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNDLLTSAQ
APLLKKWLLAKAQFIAMITLPESIFSSSKHAKTLFVLRKQEANNIQPFIYPLRDLQDHEEMFKFRQSFQNWYKDSEIQTK
F
Nucleotide
Download Length: 966 bp
>NTDB_id=887054 RSK81_RS11530 WP_314831042.1 2333600..2334565(-) (comYH) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGAATTTTGAAAAGATAGAACAAGCTTATACTCTGATTCTCGAAAACGTCCAGAATATCCAAAACACTCTGGCGACCAA
TTTTTACGATGCTCTGATTGAGCAGAACGGCATTTACCTAGATGGAGATACGGACTTACAAGAAGTTCTGGCCAACGATG
AAAAAATCCGCGCTCTGCATTTGACCAAGGAAGAGTGGCGGAGAGCCTATCAGTTTATCCTGATGAAGGCTGCCCAGACG
GAGCCCATGCAGGTCAACCATCAGTTCACTCCTGATACAATTGGTTTTCTGATTACTTTCCTGCTGGACCAGCTAGCTCA
CGGAGAGGAAGCTGATGTATTAGAAATCGGCAGCGGAACCGGAAATTTGGCTGAGACTATTCTCAACCATACTCAAAAGA
AGATAGACTATCTGGGTCTGGAGCTAGATGATTTATTAATTGACCTTTCTGCCAGCATTGCAGAGGTTATGAACTCTAAG
GCTCACTTTGCTCAGGGTGATGCGGTTCGGCCTCAGGTTCTGAAAGAGAGTGACATCATTATCAGTGATTTACCGGTCGG
TTATTATCCGGATGACAGTATCGCCTCTCGCTATGAAGTGGCTAGTCCGGATGAGCACACTTATGCCCACCATCTTCTAA
TGGAACAGTCGCTCAAATATCTTAAACCGGGAGGCTATGCCATATTTCTGGCGCCGAATGACCTCTTGACCAGCGCTCAA
GCTCCTCTGCTGAAAAAATGGCTCCTAGCCAAAGCTCAGTTCATCGCGATGATAACCTTGCCAGAGTCTATTTTCTCAAG
CAGCAAGCATGCCAAAACCCTTTTTGTCTTGAGGAAGCAAGAAGCGAATAACATTCAGCCTTTTATCTATCCTCTGCGGG
ATTTGCAGGATCATGAAGAAATGTTTAAATTCCGTCAAAGTTTTCAAAACTGGTACAAAGATAGTGAAATTCAAACAAAA
TTTTGA
ATGAATTTTGAAAAGATAGAACAAGCTTATACTCTGATTCTCGAAAACGTCCAGAATATCCAAAACACTCTGGCGACCAA
TTTTTACGATGCTCTGATTGAGCAGAACGGCATTTACCTAGATGGAGATACGGACTTACAAGAAGTTCTGGCCAACGATG
AAAAAATCCGCGCTCTGCATTTGACCAAGGAAGAGTGGCGGAGAGCCTATCAGTTTATCCTGATGAAGGCTGCCCAGACG
GAGCCCATGCAGGTCAACCATCAGTTCACTCCTGATACAATTGGTTTTCTGATTACTTTCCTGCTGGACCAGCTAGCTCA
CGGAGAGGAAGCTGATGTATTAGAAATCGGCAGCGGAACCGGAAATTTGGCTGAGACTATTCTCAACCATACTCAAAAGA
AGATAGACTATCTGGGTCTGGAGCTAGATGATTTATTAATTGACCTTTCTGCCAGCATTGCAGAGGTTATGAACTCTAAG
GCTCACTTTGCTCAGGGTGATGCGGTTCGGCCTCAGGTTCTGAAAGAGAGTGACATCATTATCAGTGATTTACCGGTCGG
TTATTATCCGGATGACAGTATCGCCTCTCGCTATGAAGTGGCTAGTCCGGATGAGCACACTTATGCCCACCATCTTCTAA
TGGAACAGTCGCTCAAATATCTTAAACCGGGAGGCTATGCCATATTTCTGGCGCCGAATGACCTCTTGACCAGCGCTCAA
GCTCCTCTGCTGAAAAAATGGCTCCTAGCCAAAGCTCAGTTCATCGCGATGATAACCTTGCCAGAGTCTATTTTCTCAAG
CAGCAAGCATGCCAAAACCCTTTTTGTCTTGAGGAAGCAAGAAGCGAATAACATTCAGCCTTTTATCTATCCTCTGCGGG
ATTTGCAGGATCATGAAGAAATGTTTAAATTCCGTCAAAGTTTTCAAAACTGGTACAAAGATAGTGAAATTCAAACAAAA
TTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
59.048 |
98.131 |
0.579 |
| comYH | Streptococcus mutans UA140 |
58.73 |
98.131 |
0.576 |