Detailed information NTG0887055

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: RSK81_RS11540
• Genome accession: NZ_CP135591
• Coordinates: 2335020..2335457 (-)
• Length: 145 a.a.
• NCBI ID: WP_002927109.1
• Uniprot ID: A0AAW7NTW0
• Organism: Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2330020..2340457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RSK81_RS11515 (RSK81_11515)	-	2330722..2331360 (-)	639	WP_061595030.1	hypothetical protein	-
RSK81_RS11520 (RSK81_11520)	-	2331478..2332227 (-)	750	WP_061595031.1	CPBP family intramembrane glutamic endopeptidase	-
RSK81_RS11525 (RSK81_11525)	-	2332370..2333563 (-)	1194	WP_002911070.1	acetate kinase	-
RSK81_RS11530 (RSK81_11530)	comYH	2333600..2334565 (-)	966	WP_314831042.1	class I SAM-dependent methyltransferase	Machinery gene
RSK81_RS11535 (RSK81_11535)	comGG	2334647..2335039 (-)	393	WP_048771947.1	competence type IV pilus minor pilin ComGG	-
RSK81_RS11540 (RSK81_11540)	comGF/cglF	2335020..2335457 (-)	438	WP_002927109.1	competence type IV pilus minor pilin ComGF	Machinery gene
RSK81_RS11545 (RSK81_11545)	comGE/cglE	2335441..2335734 (-)	294	WP_002911065.1	competence type IV pilus minor pilin ComGE	Machinery gene
RSK81_RS11550 (RSK81_11550)	comYD	2335700..2336134 (-)	435	WP_002934686.1	competence type IV pilus minor pilin ComGD	Machinery gene
RSK81_RS11555 (RSK81_11555)	comYC	2336094..2336411 (-)	318	WP_002927120.1	competence type IV pilus major pilin ComGC	Machinery gene
RSK81_RS11560 (RSK81_11560)	comYB	2336411..2337445 (-)	1035	WP_260469178.1	competence type IV pilus assembly protein ComGB	Machinery gene
RSK81_RS11565 (RSK81_11565)	comYA	2337375..2338316 (-)	942	WP_315686885.1	competence type IV pilus ATPase ComGA	Machinery gene
RSK81_RS11570 (RSK81_11570)	-	2338446..2338826 (-)	381	WP_002901723.1	DUF1033 family protein	-
RSK81_RS11575 (RSK81_11575)	-	2339145..2340251 (-)	1107	WP_002923025.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16769.00 Da
• Isoelectric Point: 5.3160

>NTDB_id=887055 RSK81_RS11540 WP_002927109.1 2335020..2335457(-) (comGF/cglF) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MSKNLKVKAFTLLEALVALLVLSGGVLVFQAMTQLLSSELHQQENNQQQEWLLFTDQLETELSRSQFDKVEDNKIYIRQD
GRDLALGKSKGDDFRKTDKSGRGYQPMIYGLEAADVRQDGKLVHLHFRFEKGLEREFVYRVEEES

Nucleotide

• Length: 438 bp

>NTDB_id=887055 RSK81_RS11540 WP_002927109.1 2335020..2335457(-) (comGF/cglF) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
GTGTCCAAAAACCTTAAAGTCAAGGCCTTTACTCTCTTGGAGGCTTTAGTAGCCTTGCTGGTTCTCAGTGGCGGTGTGTT
AGTCTTTCAGGCCATGACCCAGCTCTTATCTTCAGAACTGCATCAGCAGGAAAACAATCAGCAGCAAGAGTGGCTTTTGT
TTACCGACCAACTGGAGACGGAGCTTTCGCGAAGTCAATTTGACAAGGTAGAAGACAATAAAATCTACATCAGACAAGAT
GGCAGGGACTTGGCCTTGGGTAAATCCAAGGGCGATGATTTCCGTAAAACAGATAAGAGTGGTCGCGGCTACCAGCCCAT
GATTTATGGTTTAGAAGCAGCTGACGTCCGTCAGGACGGTAAGCTTGTCCATCTTCATTTTCGCTTTGAAAAAGGCTTAG
AGAGGGAGTTCGTCTATCGTGTGGAAGAAGAAAGTTGA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	65.035	98.621	0.641
comGF/cglF	Streptococcus pneumoniae D39	65.035	98.621	0.641
comGF/cglF	Streptococcus pneumoniae R6	65.035	98.621	0.641
comGF/cglF	Streptococcus pneumoniae TIGR4	65.035	98.621	0.641
comGF/cglF	Streptococcus mitis SK321	63.636	98.621	0.628
comGF/cglF	Streptococcus mitis NCTC 12261	62.238	98.621	0.614
comYF	Streptococcus mutans UA159	47.857	96.552	0.462
comYF	Streptococcus mutans UA140	47.143	96.552	0.455
comGF	Lactococcus lactis subsp. cremoris KW2	41.912	93.793	0.393