Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   QLQ02_RS06845 Genome accession   NZ_CP127833
Coordinates   1350556..1350846 (+) Length   96 a.a.
NCBI ID   WP_003226760.1    Uniprot ID   A0A7G9PCZ4
Organism   Bacillus mojavensis strain KRS009     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345556..1355846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS06830 - 1345750..1346973 (-) 1224 WP_286059776.1 G5 and 3D domain-containing protein -
  QLQ02_RS06835 - 1347219..1347986 (-) 768 WP_286059174.1 TatD family hydrolase -
  QLQ02_RS06840 metG 1348065..1350059 (-) 1995 WP_286059175.1 methionine--tRNA ligase -
  QLQ02_RS06845 abrB 1350556..1350846 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  QLQ02_RS06850 rsmI 1350896..1351774 (-) 879 WP_026014644.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QLQ02_RS06855 - 1351749..1352048 (-) 300 WP_010332689.1 GIY-YIG nuclease family protein -
  QLQ02_RS06860 - 1352035..1352778 (-) 744 WP_286059176.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  QLQ02_RS06865 yabA 1352839..1353198 (-) 360 WP_010332687.1 replication initiation-control protein YabA -
  QLQ02_RS06870 ricT 1353213..1354040 (-) 828 WP_010332686.1 competence/sporulation regulator complex protein RicT -
  QLQ02_RS06875 holB 1354043..1355032 (-) 990 WP_286059177.1 DNA polymerase III subunit delta' -
  QLQ02_RS06880 - 1355044..1355484 (-) 441 WP_010332684.1 YaaR family protein -
  QLQ02_RS06885 darA 1355497..1355826 (-) 330 WP_003218295.1 cyclic di-AMP receptor DarA -

Sequence

Protein


Download         Length: 96 a.a.        Molecular weight: 10772.62 Da        Isoelectric Point: 6.3482

>NTDB_id=844432 QLQ02_RS06845 WP_003226760.1 1350556..1350846(+) (abrB) [Bacillus mojavensis strain KRS009]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK

Nucleotide


Download         Length: 291 bp        

>NTDB_id=844432 QLQ02_RS06845 WP_003226760.1 1350556..1350846(+) (abrB) [Bacillus mojavensis strain KRS009]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(55-90)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(10-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9PCZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

100

100

1