Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | M8120_RS11690 | Genome accession | NZ_CP097576 |
| Coordinates | 2319172..2320275 (-) | Length | 367 a.a. |
| NCBI ID | WP_190359643.1 | Uniprot ID | - |
| Organism | Microcystis aeruginosa str. Chao 1910 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2314172..2325275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8120_RS11670 (M8120_11550) | - | 2314294..2315487 (+) | 1194 | WP_265795552.1 | IS4 family transposase | - |
| M8120_RS11675 (M8120_11555) | - | 2315900..2316988 (-) | 1089 | Protein_2316 | ISAs1 family transposase | - |
| M8120_RS11680 (M8120_11560) | - | 2317146..2317682 (-) | 537 | WP_190359645.1 | hypothetical protein | - |
| M8120_RS11685 (M8120_11565) | - | 2317784..2318998 (-) | 1215 | WP_190359644.1 | type II secretion system F family protein | - |
| M8120_RS11690 (M8120_11570) | pilT | 2319172..2320275 (-) | 1104 | WP_190359643.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| M8120_RS11695 (M8120_11575) | pilB/pilB1 | 2320449..2322464 (-) | 2016 | WP_190359642.1 | GspE/PulE family protein | Machinery gene |
| M8120_RS11700 (M8120_11580) | - | 2322987..2324909 (-) | 1923 | WP_190359641.1 | S9 family peptidase | - |
Sequence
Protein
Download Length: 367 a.a. Molecular weight: 40432.55 Da Isoelectric Point: 7.3537
>NTDB_id=690294 M8120_RS11690 WP_190359643.1 2319172..2320275(-) (pilT) [Microcystis aeruginosa str. Chao 1910]
MEMIEDLMQQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQRLIFSMLNNTQRKELEQNWELDCSYGVKGLA
RFRVNVYKERGAYAACLRALSSKIPNFEQLNLPEVVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTVE
DPIEYVFSNIKSLFHQRQKGEDTKSFANALKSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTNSAAGTVDR
IIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFARAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGMQ
TMEQGLANLVVSGVVSFEEAISKSGKPDELQRLVAGASANVKTKARL
MEMIEDLMQQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQRLIFSMLNNTQRKELEQNWELDCSYGVKGLA
RFRVNVYKERGAYAACLRALSSKIPNFEQLNLPEVVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTVE
DPIEYVFSNIKSLFHQRQKGEDTKSFANALKSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTNSAAGTVDR
IIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFARAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGMQ
TMEQGLANLVVSGVVSFEEAISKSGKPDELQRLVAGASANVKTKARL
Nucleotide
Download Length: 1104 bp
>NTDB_id=690294 M8120_RS11690 WP_190359643.1 2319172..2320275(-) (pilT) [Microcystis aeruginosa str. Chao 1910]
ATGGAAATGATCGAAGATTTAATGCAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCACCGGT
CTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAGATTGATTTTTA
GTATGCTCAATAATACTCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTAGCA
AGATTTAGGGTCAATGTTTATAAAGAAAGGGGTGCTTATGCAGCTTGTTTACGGGCTTTGTCCTCTAAAATTCCTAACTT
TGAACAATTAAATTTACCAGAAGTAGTCCGGGAGTTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGCCAAACAG
GTTCAGGGAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTCGTTCCGAGCATATTTTAACGGTAGAA
GACCCAATTGAATACGTTTTTTCTAATATAAAAAGCCTGTTTCACCAAAGACAAAAAGGAGAAGATACCAAGAGTTTTGC
TAACGCATTAAAATCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTAGTT
TGGCAATCACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAACTCGGCAGCGGGAACAGTGGATCGG
ATTATTGACGTTTTTCCTGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTCTACTAGCAGTTTTTAGTCA
AAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGCTCGAGCAATGGTACAGGAAATCATGGTGGTAACTCCAG
CGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGTTAGGAATGCAA
ACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTGTCTCCTTTGAAGAAGCAATTTCTAAAAGTGGTAAACC
CGATGAATTACAACGTCTTGTCGCTGGGGCGAGCGCTAATGTTAAAACTAAAGCCCGGCTCTAA
ATGGAAATGATCGAAGATTTAATGCAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCTGGGGCACCGGT
CTATTTTCGCATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAGATTGATTTTTA
GTATGCTCAATAATACTCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTAGCA
AGATTTAGGGTCAATGTTTATAAAGAAAGGGGTGCTTATGCAGCTTGTTTACGGGCTTTGTCCTCTAAAATTCCTAACTT
TGAACAATTAAATTTACCAGAAGTAGTCCGGGAGTTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGCCAAACAG
GTTCAGGGAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTCGTTCCGAGCATATTTTAACGGTAGAA
GACCCAATTGAATACGTTTTTTCTAATATAAAAAGCCTGTTTCACCAAAGACAAAAAGGAGAAGATACCAAGAGTTTTGC
TAACGCATTAAAATCAGCTTTACGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTAGTT
TGGCAATCACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAACTCGGCAGCGGGAACAGTGGATCGG
ATTATTGACGTTTTTCCTGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTCTACTAGCAGTTTTTAGTCA
AAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGCTCGAGCAATGGTACAGGAAATCATGGTGGTAACTCCAG
CGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGTTAGGAATGCAA
ACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTGTCTCCTTTGAAGAAGCAATTTCTAAAAGTGGTAAACC
CGATGAATTACAACGTCTTGTCGCTGGGGCGAGCGCTAATGTTAAAACTAAAGCCCGGCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
52.754 |
94.005 |
0.496 |
| pilT | Legionella pneumophila strain Lp02 |
52.754 |
94.005 |
0.496 |
| pilT | Pseudomonas aeruginosa PAK |
51.585 |
94.55 |
0.488 |
| pilT | Acinetobacter baumannii D1279779 |
51.009 |
94.55 |
0.482 |
| pilT | Acinetobacter baumannii strain A118 |
51.009 |
94.55 |
0.482 |
| pilT | Acinetobacter nosocomialis M2 |
51.009 |
94.55 |
0.482 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.72 |
94.55 |
0.48 |
| pilT | Acinetobacter baylyi ADP1 |
50.144 |
94.55 |
0.474 |
| pilT | Vibrio cholerae strain A1552 |
50.882 |
92.643 |
0.471 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.882 |
92.643 |
0.471 |
| pilT | Neisseria gonorrhoeae MS11 |
49.555 |
91.826 |
0.455 |
| pilT | Neisseria meningitidis 8013 |
49.555 |
91.826 |
0.455 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.413 |
97.548 |
0.433 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.462 |
95.64 |
0.368 |