Detailed information NTG0064274

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HRR23_RS21545
• Genome accession: NZ_AP021894
• Coordinates: 4444996..4446021 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-10-1CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4439996..4451021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRR23_RS21525 (VEGS09_42140)	metJ	4441057..4441374 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
HRR23_RS21530 (VEGS09_42150)	yiiX	4441558..4442166 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
HRR23_RS21535 (VEGS09_42160)	rpmE	4442227..4442439 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
HRR23_RS21540 (VEGS09_42170)	priA	4442642..4444840 (+)	2199	WP_172410299.1	primosomal protein N'	Machinery gene
HRR23_RS21545 (VEGS09_42180)	cytR	4444996..4446021 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
HRR23_RS21550 (VEGS09_42190)	ftsN	4446113..4447072 (+)	960	WP_074169940.1	cell division protein FtsN	-
HRR23_RS21555 (VEGS09_42200)	hslV	4447165..4447695 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HRR23_RS21560 (VEGS09_42210)	hslU	4447705..4449036 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
HRR23_RS21565 (VEGS09_42220)	menA	4449103..4450029 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HRR23_RS21570 (VEGS09_42230)	rraA	4450122..4450607 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HRR23_RS21575 (VEGS09_42240)	zapB	4450692..4450937 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=64274 HRR23_RS21545 WP_000644904.1 4444996..4446021(+) (cytR) [Escherichia coli strain 2018-10-1CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=64274 HRR23_RS21545 WP_000644904.1 4444996..4446021(+) (cytR) [Escherichia coli strain 2018-10-1CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628