Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | K9N68_RS27395 | Genome accession | NZ_CP083582 |
| Coordinates | 5855701..5856816 (+) | Length | 371 a.a. |
| NCBI ID | WP_224341403.1 | Uniprot ID | - |
| Organism | Kovacikia minuta CCNUW1 strain CCNU0001 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5850701..5861816
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9N68_RS27385 (K9N68_27385) | grpE | 5851971..5852714 (-) | 744 | WP_224341401.1 | nucleotide exchange factor GrpE | - |
| K9N68_RS27390 (K9N68_27390) | pilB/pilB1 | 5853515..5855512 (+) | 1998 | WP_224341402.1 | GspE/PulE family protein | Machinery gene |
| K9N68_RS27395 (K9N68_27395) | pilT | 5855701..5856816 (+) | 1116 | WP_224341403.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| K9N68_RS27400 (K9N68_27400) | - | 5856978..5858201 (+) | 1224 | WP_224341404.1 | type II secretion system F family protein | - |
| K9N68_RS27405 (K9N68_27405) | - | 5858328..5858930 (+) | 603 | WP_224341405.1 | hypothetical protein | - |
| K9N68_RS27410 (K9N68_27410) | - | 5859091..5861610 (-) | 2520 | WP_224341406.1 | serine/threonine-protein kinase | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 40724.89 Da Isoelectric Point: 6.7591
>NTDB_id=606348 K9N68_RS27395 WP_224341403.1 5855701..5856816(+) (pilT) [Kovacikia minuta CCNUW1 strain CCNU0001]
MELMIEDLMEQLIEMGGSDLHLTAGLPPYFRISGHLQPIGDQSLTAEECQRLIFSMLNNTQRKNLEQNWELDCSYGVRGL
ARFRVNVYKDRGTYAACLRALSSKIPNFEKLGLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTI
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RMIDVFPSERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIITPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADQYKAGLITFEAAMSKTSRPDELQRLIGGAPAGAAQAGAAAKR
MELMIEDLMEQLIEMGGSDLHLTAGLPPYFRISGHLQPIGDQSLTAEECQRLIFSMLNNTQRKNLEQNWELDCSYGVRGL
ARFRVNVYKDRGTYAACLRALSSKIPNFEKLGLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTI
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RMIDVFPSERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIITPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADQYKAGLITFEAAMSKTSRPDELQRLIGGAPAGAAQAGAAAKR
Nucleotide
Download Length: 1116 bp
>NTDB_id=606348 K9N68_RS27395 WP_224341403.1 5855701..5856816(+) (pilT) [Kovacikia minuta CCNUW1 strain CCNU0001]
ATGGAGTTGATGATTGAAGACCTGATGGAGCAGTTGATTGAAATGGGCGGCTCCGATTTGCATCTAACAGCAGGTCTTCC
CCCCTATTTCCGCATCAGCGGCCACTTACAACCGATCGGTGACCAATCTTTGACTGCTGAAGAATGTCAACGATTAATCT
TCAGTATGTTGAATAATACCCAGCGGAAAAACCTGGAACAAAACTGGGAGTTGGACTGTTCCTATGGCGTGCGGGGTTTG
GCTCGTTTTAGGGTCAATGTGTACAAGGATCGGGGAACCTACGCTGCCTGCCTGCGGGCACTAAGCTCCAAAATCCCCAA
CTTTGAAAAATTGGGGCTACCAGATGTGGTACGGGAAATGTCAGAAAAGCCAAGGGGATTGATTCTGGTGACAGGACCCA
CGGGTTCTGGCAAAACCACAACCCTGGCTGCCATGATCGATTTGATTAACCGCACACGGGCAGAACATATTCTGACGATC
GAAGACCCGATCGAATTTGTTTACGAACCGATTAAAAGTCTGGTTCACCAGCGTCAGTTGGGGGAAGATACGAAGAGTTT
TGCCAACGCCTTGAAAGCAGCCCTGCGGGAAGATCCAGATATCATCCTGGTCGGTGAAATGCGTGATCTGGAAACGATCT
CGCTGGCAATTTCCGCCGCAGAAACCGGACACTTAGTATTTGGGACATTACACACCAGTTCCGCCTCCCAAACGGTAGAC
CGGATGATTGATGTGTTTCCTTCCGAAAGACAGACCCAGGTAAGGGTTCAGCTTTCCAACTCGCTGGTTGCTGTCTTTAG
CCAAACCCTGGTTCCTAAGAAAAACCCTAAACCCGGTGAATATGGTCGGGTCATGGCTCAGGAAATTATGATCATTACGC
CTGCTATCTCAAACCTGATCCGGGAAGGGAAAACCGCTCAGATTTATTCTGCGATTCAAACCGGAGGCAAACTAGGAATG
CAAACGCTAGAAAAGGTTTTGGCAGACCAGTATAAGGCTGGCTTGATTACCTTTGAGGCCGCCATGTCCAAAACATCACG
CCCCGACGAGCTCCAACGTTTAATTGGAGGAGCACCCGCAGGAGCCGCCCAGGCAGGTGCTGCGGCAAAGCGCTAA
ATGGAGTTGATGATTGAAGACCTGATGGAGCAGTTGATTGAAATGGGCGGCTCCGATTTGCATCTAACAGCAGGTCTTCC
CCCCTATTTCCGCATCAGCGGCCACTTACAACCGATCGGTGACCAATCTTTGACTGCTGAAGAATGTCAACGATTAATCT
TCAGTATGTTGAATAATACCCAGCGGAAAAACCTGGAACAAAACTGGGAGTTGGACTGTTCCTATGGCGTGCGGGGTTTG
GCTCGTTTTAGGGTCAATGTGTACAAGGATCGGGGAACCTACGCTGCCTGCCTGCGGGCACTAAGCTCCAAAATCCCCAA
CTTTGAAAAATTGGGGCTACCAGATGTGGTACGGGAAATGTCAGAAAAGCCAAGGGGATTGATTCTGGTGACAGGACCCA
CGGGTTCTGGCAAAACCACAACCCTGGCTGCCATGATCGATTTGATTAACCGCACACGGGCAGAACATATTCTGACGATC
GAAGACCCGATCGAATTTGTTTACGAACCGATTAAAAGTCTGGTTCACCAGCGTCAGTTGGGGGAAGATACGAAGAGTTT
TGCCAACGCCTTGAAAGCAGCCCTGCGGGAAGATCCAGATATCATCCTGGTCGGTGAAATGCGTGATCTGGAAACGATCT
CGCTGGCAATTTCCGCCGCAGAAACCGGACACTTAGTATTTGGGACATTACACACCAGTTCCGCCTCCCAAACGGTAGAC
CGGATGATTGATGTGTTTCCTTCCGAAAGACAGACCCAGGTAAGGGTTCAGCTTTCCAACTCGCTGGTTGCTGTCTTTAG
CCAAACCCTGGTTCCTAAGAAAAACCCTAAACCCGGTGAATATGGTCGGGTCATGGCTCAGGAAATTATGATCATTACGC
CTGCTATCTCAAACCTGATCCGGGAAGGGAAAACCGCTCAGATTTATTCTGCGATTCAAACCGGAGGCAAACTAGGAATG
CAAACGCTAGAAAAGGTTTTGGCAGACCAGTATAAGGCTGGCTTGATTACCTTTGAGGCCGCCATGTCCAAAACATCACG
CCCCGACGAGCTCCAACGTTTAATTGGAGGAGCACCCGCAGGAGCCGCCCAGGCAGGTGCTGCGGCAAAGCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.755 |
93.531 |
0.512 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.89 |
93.531 |
0.504 |
| pilT | Acinetobacter baylyi ADP1 |
52.45 |
93.531 |
0.491 |
| pilT | Legionella pneumophila strain Lp02 |
52.754 |
92.992 |
0.491 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.754 |
92.992 |
0.491 |
| pilT | Acinetobacter baumannii strain A118 |
51.873 |
93.531 |
0.485 |
| pilT | Acinetobacter nosocomialis M2 |
51.873 |
93.531 |
0.485 |
| pilT | Acinetobacter baumannii D1279779 |
51.873 |
93.531 |
0.485 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.753 |
97.305 |
0.474 |
| pilT | Neisseria gonorrhoeae MS11 |
51.032 |
91.375 |
0.466 |
| pilT | Neisseria meningitidis 8013 |
50.737 |
91.375 |
0.464 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.706 |
91.644 |
0.456 |
| pilT | Vibrio cholerae strain A1552 |
49.706 |
91.644 |
0.456 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.601 |
94.609 |
0.375 |