Detailed information NTG0593616

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: M2M89_RS03640
• Genome accession: NZ_CP097130
• Coordinates: 717153..718283 (+)
• Length: 376 a.a.
• NCBI ID: WP_128441419.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain S16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 712153..723283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2M89_RS03625	yezG	713291..713746 (-)	456	WP_072173434.1	TIGR01741 family protein	-
M2M89_RS03630	yeeF	713766..715775 (-)	2010	WP_041851218.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
M2M89_RS03635	-	715988..717010 (+)	1023	WP_072173411.1	hypothetical protein	-
M2M89_RS03640	rapC	717153..718283 (+)	1131	WP_128441419.1	response regulator aspartate phosphatase RapH	Regulator
M2M89_RS03645	phrH	718273..718446 (+)	174	WP_069837348.1	phosphatase RapH inhibitor PhrH	-
M2M89_RS03650	yeeI	718606..719325 (+)	720	WP_003233863.1	YebC/PmpR family DNA-binding transcriptional regulator	-
M2M89_RS03655	-	719459..719887 (+)	429	WP_128441421.1	spore coat protein	-
M2M89_RS03660	yezE	720002..720586 (+)	585	WP_128441423.1	TetR/AcrR family transcriptional regulator	-
M2M89_RS03665	yesE	720666..721109 (+)	444	WP_015715468.1	nuclear transport factor 2 family protein	-
M2M89_RS03670	yesF	721106..721971 (+)	866	Protein_673	NAD-dependent epimerase/dehydratase family protein	-
M2M89_RS03675	cotJA	722101..722349 (+)	249	WP_088467559.1	spore coat-associated protein CotJA	-
M2M89_RS03680	cotJB	722333..722596 (+)	264	WP_003219491.1	spore coat protein CotJB	-
M2M89_RS03685	cotJC	722611..723180 (+)	570	WP_003233850.1	spore coat protein CotJC	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 43917.14 Da
• Isoelectric Point: 5.7144

>NTDB_id=593616 M2M89_RS03640 WP_128441419.1 717153..718283(+) (rapC) [Bacillus subtilis strain S16]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDDIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACSRSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide

• Length: 1131 bp

>NTDB_id=593616 M2M89_RS03640 WP_128441419.1 717153..718283(+) (rapC) [Bacillus subtilis strain S16]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGATATTGAGAAAGCCGAATTCCATTTTAAAGTGGCAGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTGGACATTTATCAAAACCATCCTCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTAGATTTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGCAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTTCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_7) (222-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.426	100	0.404
rapF	Bacillus subtilis subsp. subtilis str. 168	39.523	100	0.396