Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | DACSA_RS06000 | Genome accession | NC_019780 |
| Coordinates | 1189889..1191004 (-) | Length | 371 a.a. |
| NCBI ID | WP_015228892.1 | Uniprot ID | K9YUT9 |
| Organism | Dactylococcopsis salina PCC 8305 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1184889..1196004
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DACSA_RS20355 | - | 1185968..1186252 (+) | 285 | WP_156800680.1 | hypothetical protein | - |
| DACSA_RS05985 (Dacsa_1179) | ald | 1186198..1187277 (+) | 1080 | WP_015228889.1 | alanine dehydrogenase | - |
| DACSA_RS05990 (Dacsa_1180) | - | 1188050..1188619 (-) | 570 | WP_041235716.1 | hypothetical protein | - |
| DACSA_RS05995 (Dacsa_1181) | - | 1188639..1189859 (-) | 1221 | WP_015228891.1 | type II secretion system F family protein | - |
| DACSA_RS06000 (Dacsa_1182) | pilT | 1189889..1191004 (-) | 1116 | WP_015228892.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| DACSA_RS06005 (Dacsa_1184) | pilB/pilB1 | 1191377..1193395 (-) | 2019 | WP_015228894.1 | GspE/PulE family protein | Machinery gene |
| DACSA_RS06010 (Dacsa_1185) | bchL | 1193991..1194863 (+) | 873 | WP_015228895.1 | ferredoxin:protochlorophyllide reductase (ATP-dependent) iron-sulfur ATP-binding protein | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41010.99 Da Isoelectric Point: 7.0249
>NTDB_id=55067 DACSA_RS06000 WP_015228892.1 1189889..1191004(-) (pilT) [Dactylococcopsis salina PCC 8305]
MELMIEDLMEQLVEKGGSDMHIQAGAPVYFRYSGKLQPVGDEPLTPQETQRLIFSMLNNSQRKQLEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNYEKLGLPDVVKEMAGYPRGLILVTGPTGSGKTTTLAAILDMINRTRHEHVLTV
EDPIEYVFPNEKCLFHQRQKGEDTKSFANALKAALREDPDIILVGELRDLETISLAVTAAETGHLVFGTLHTSSAGGTVD
RMVDVFPAEQQEQIRAQLSGSLVAVFSQCLPKKQNPKPGEFGRVLAQEIMVVTPAIANQIREGKTSQIYSSIQTGMKLGM
QTMEQSLAYWVNQGAISMEEAISKSSKPDELDRLTAGSVAKNSKTQAKTKR
MELMIEDLMEQLVEKGGSDMHIQAGAPVYFRYSGKLQPVGDEPLTPQETQRLIFSMLNNSQRKQLEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNYEKLGLPDVVKEMAGYPRGLILVTGPTGSGKTTTLAAILDMINRTRHEHVLTV
EDPIEYVFPNEKCLFHQRQKGEDTKSFANALKAALREDPDIILVGELRDLETISLAVTAAETGHLVFGTLHTSSAGGTVD
RMVDVFPAEQQEQIRAQLSGSLVAVFSQCLPKKQNPKPGEFGRVLAQEIMVVTPAIANQIREGKTSQIYSSIQTGMKLGM
QTMEQSLAYWVNQGAISMEEAISKSSKPDELDRLTAGSVAKNSKTQAKTKR
Nucleotide
Download Length: 1116 bp
>NTDB_id=55067 DACSA_RS06000 WP_015228892.1 1189889..1191004(-) (pilT) [Dactylococcopsis salina PCC 8305]
ATGGAATTAATGATCGAAGACTTGATGGAACAATTAGTGGAAAAAGGCGGTTCTGATATGCACATTCAAGCGGGTGCGCC
TGTCTATTTCCGCTACAGTGGAAAACTGCAACCCGTTGGAGATGAACCCCTAACGCCACAAGAAACACAGCGACTAATTT
TTAGTATGCTCAATAACAGTCAACGGAAACAATTAGAGCAAAATTGGGAATTAGACTGTTCTTATGGGGTAAAAGGTTTG
GCGCGGTTTCGAGTTAATGTTTATAAAGAGCGCGGTTGCTATGCGGCTTGTTTACGAGCCTTATCCTCGAAAATTCCTAA
CTATGAAAAATTAGGACTGCCAGATGTGGTGAAAGAAATGGCAGGTTATCCCAGAGGATTAATTCTGGTGACAGGACCCA
CTGGTTCGGGAAAAACCACAACTCTAGCCGCGATTTTAGACATGATTAATCGCACTCGCCACGAGCACGTTTTAACGGTA
GAAGACCCCATCGAGTATGTTTTTCCGAACGAAAAATGTCTGTTTCACCAACGACAAAAAGGAGAAGATACAAAAAGTTT
TGCCAATGCTTTAAAAGCTGCTTTACGGGAAGACCCAGATATTATTCTGGTGGGAGAATTACGAGATTTAGAAACCATTT
CGTTAGCGGTAACCGCAGCGGAAACGGGTCACTTAGTTTTTGGAACATTACACACCAGTTCCGCCGGTGGAACGGTTGAC
CGCATGGTAGATGTGTTTCCCGCCGAACAACAAGAGCAAATTCGAGCGCAACTTTCGGGTTCATTAGTCGCAGTGTTTAG
TCAGTGTTTACCGAAAAAGCAAAATCCGAAACCTGGGGAATTCGGACGAGTGCTGGCGCAGGAAATTATGGTGGTGACTC
CTGCTATTGCCAACCAAATTCGAGAGGGAAAAACTTCACAGATTTATTCTTCGATTCAAACGGGAATGAAACTGGGAATG
CAAACGATGGAACAGTCTTTGGCGTATTGGGTGAATCAAGGGGCAATTTCTATGGAAGAAGCCATCTCCAAAAGTAGTAA
ACCCGATGAGTTAGATCGTCTCACCGCAGGTTCAGTAGCGAAAAACAGCAAAACTCAAGCGAAGACAAAACGTTAA
ATGGAATTAATGATCGAAGACTTGATGGAACAATTAGTGGAAAAAGGCGGTTCTGATATGCACATTCAAGCGGGTGCGCC
TGTCTATTTCCGCTACAGTGGAAAACTGCAACCCGTTGGAGATGAACCCCTAACGCCACAAGAAACACAGCGACTAATTT
TTAGTATGCTCAATAACAGTCAACGGAAACAATTAGAGCAAAATTGGGAATTAGACTGTTCTTATGGGGTAAAAGGTTTG
GCGCGGTTTCGAGTTAATGTTTATAAAGAGCGCGGTTGCTATGCGGCTTGTTTACGAGCCTTATCCTCGAAAATTCCTAA
CTATGAAAAATTAGGACTGCCAGATGTGGTGAAAGAAATGGCAGGTTATCCCAGAGGATTAATTCTGGTGACAGGACCCA
CTGGTTCGGGAAAAACCACAACTCTAGCCGCGATTTTAGACATGATTAATCGCACTCGCCACGAGCACGTTTTAACGGTA
GAAGACCCCATCGAGTATGTTTTTCCGAACGAAAAATGTCTGTTTCACCAACGACAAAAAGGAGAAGATACAAAAAGTTT
TGCCAATGCTTTAAAAGCTGCTTTACGGGAAGACCCAGATATTATTCTGGTGGGAGAATTACGAGATTTAGAAACCATTT
CGTTAGCGGTAACCGCAGCGGAAACGGGTCACTTAGTTTTTGGAACATTACACACCAGTTCCGCCGGTGGAACGGTTGAC
CGCATGGTAGATGTGTTTCCCGCCGAACAACAAGAGCAAATTCGAGCGCAACTTTCGGGTTCATTAGTCGCAGTGTTTAG
TCAGTGTTTACCGAAAAAGCAAAATCCGAAACCTGGGGAATTCGGACGAGTGCTGGCGCAGGAAATTATGGTGGTGACTC
CTGCTATTGCCAACCAAATTCGAGAGGGAAAAACTTCACAGATTTATTCTTCGATTCAAACGGGAATGAAACTGGGAATG
CAAACGATGGAACAGTCTTTGGCGTATTGGGTGAATCAAGGGGCAATTTCTATGGAAGAAGCCATCTCCAAAAGTAGTAA
ACCCGATGAGTTAGATCGTCTCACCGCAGGTTCAGTAGCGAAAAACAGCAAAACTCAAGCGAAGACAAAACGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
53.333 |
92.992 |
0.496 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.333 |
92.992 |
0.496 |
| pilT | Pseudomonas aeruginosa PAK |
51.297 |
93.531 |
0.48 |
| pilT | Acinetobacter baumannii D1279779 |
50.72 |
93.531 |
0.474 |
| pilT | Acinetobacter nosocomialis M2 |
50.72 |
93.531 |
0.474 |
| pilT | Acinetobacter baumannii strain A118 |
50.72 |
93.531 |
0.474 |
| pilT | Acinetobacter baylyi ADP1 |
50.432 |
93.531 |
0.472 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.144 |
93.531 |
0.469 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.147 |
91.914 |
0.461 |
| pilT | Vibrio cholerae strain A1552 |
50.147 |
91.914 |
0.461 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.857 |
94.34 |
0.461 |
| pilT | Neisseria gonorrhoeae MS11 |
48.378 |
91.375 |
0.442 |
| pilT | Neisseria meningitidis 8013 |
48.378 |
91.375 |
0.442 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.617 |
93.531 |
0.361 |