Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CRI9333_RS18780 | Genome accession | NC_019753 |
| Coordinates | 4333418..4334503 (+) | Length | 361 a.a. |
| NCBI ID | WP_015204750.1 | Uniprot ID | K9W5C1 |
| Organism | Crinalium epipsammum PCC 9333 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4328418..4339503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRI9333_RS18765 (Cri9333_3838) | grpE | 4329720..4330472 (-) | 753 | WP_015204748.1 | nucleotide exchange factor GrpE | - |
| CRI9333_RS18770 | - | 4330508..4330696 (+) | 189 | WP_041226121.1 | hypothetical protein | - |
| CRI9333_RS18775 (Cri9333_3839) | pilB/pilB1 | 4331331..4333325 (+) | 1995 | WP_015204749.1 | GspE/PulE family protein | Machinery gene |
| CRI9333_RS18780 (Cri9333_3840) | pilT | 4333418..4334503 (+) | 1086 | WP_015204750.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CRI9333_RS18785 (Cri9333_3841) | - | 4334618..4335844 (+) | 1227 | WP_015204751.1 | type II secretion system F family protein | - |
| CRI9333_RS18790 (Cri9333_3842) | rlmN | 4335949..4337019 (+) | 1071 | WP_015204752.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| CRI9333_RS18795 (Cri9333_3843) | - | 4337034..4337234 (-) | 201 | WP_015204753.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 39783.14 Da Isoelectric Point: 7.0336
>NTDB_id=54967 CRI9333_RS18780 WP_015204750.1 4333418..4334503(+) (pilT) [Crinalium epipsammum PCC 9333]
MDLMIEDLMEQLIEMGGSDMHLQAGAPVYFRVSGKLQAINEEPLAPQDCQKLIFSMLNNTQRKDLEQNWELDCSYGVKGL
ARFRVNVYKERGYYAACLRALASKIPNFDMLGLPDIVREMTHRPRGMVLVTGQTGSGKTTTMAAMIDLINRTRAEHILTV
EDPIEYVFANIKSLVHQRQKGEDTKSFANALRAALREDPDVILVGEMRDLETIGLAISAAETGHLVFGTLHTNSAAQTID
RMLDVFPPIQQPQIRAQLSNSLVAVFSQCLVPKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTPQIYGSIQTGAKLGM
QTMEMVLAAYVKSGAISFEAAMGKSAKPDELQRLLGAAVAK
MDLMIEDLMEQLIEMGGSDMHLQAGAPVYFRVSGKLQAINEEPLAPQDCQKLIFSMLNNTQRKDLEQNWELDCSYGVKGL
ARFRVNVYKERGYYAACLRALASKIPNFDMLGLPDIVREMTHRPRGMVLVTGQTGSGKTTTMAAMIDLINRTRAEHILTV
EDPIEYVFANIKSLVHQRQKGEDTKSFANALRAALREDPDVILVGEMRDLETIGLAISAAETGHLVFGTLHTNSAAQTID
RMLDVFPPIQQPQIRAQLSNSLVAVFSQCLVPKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTPQIYGSIQTGAKLGM
QTMEMVLAAYVKSGAISFEAAMGKSAKPDELQRLLGAAVAK
Nucleotide
Download Length: 1086 bp
>NTDB_id=54967 CRI9333_RS18780 WP_015204750.1 4333418..4334503(+) (pilT) [Crinalium epipsammum PCC 9333]
ATGGATTTAATGATTGAAGACTTGATGGAGCAACTGATCGAAATGGGCGGCTCCGATATGCACCTTCAGGCGGGCGCTCC
AGTATACTTTCGGGTCAGTGGTAAACTCCAGGCGATTAATGAGGAGCCACTGGCACCTCAAGATTGTCAGAAATTAATTT
TTAGTATGCTGAATAATACCCAGCGTAAAGATTTGGAACAGAACTGGGAATTAGATTGCTCTTATGGGGTGAAAGGATTA
GCTCGTTTCCGAGTCAATGTCTACAAAGAACGTGGTTACTATGCAGCTTGTCTAAGGGCTTTAGCGTCTAAAATTCCTAA
TTTTGATATGTTAGGTCTACCAGATATTGTTCGGGAAATGACTCACCGACCTAGAGGAATGGTGTTAGTAACCGGACAAA
CGGGTTCGGGTAAAACGACTACGATGGCGGCAATGATTGATTTGATTAACCGCACACGAGCAGAACATATTTTGACTGTA
GAAGACCCGATTGAATATGTTTTTGCTAATATTAAAAGTTTAGTTCACCAACGTCAAAAAGGTGAGGATACTAAAAGTTT
TGCTAATGCTTTGAGAGCGGCATTACGGGAAGATCCAGATGTAATTTTGGTAGGTGAAATGCGGGACTTGGAAACAATTG
GTCTAGCAATTTCTGCTGCTGAAACAGGTCACTTGGTATTTGGAACGCTGCATACTAATTCCGCCGCTCAAACTATAGAC
CGGATGCTAGATGTATTCCCCCCTATTCAACAACCACAAATTAGGGCGCAGCTATCTAACTCTTTGGTGGCTGTATTTAG
CCAATGTTTAGTGCCTAAGAAAAATCCCAAGCCTGGGGAATATGGTCGGGTAATGGCTCAAGAAATTATGATCGTAACAC
CAGCTATTTCTAACTTAATTCGAGAAGGAAAAACCCCTCAAATTTACGGTTCTATCCAAACTGGTGCTAAGTTGGGGATG
CAGACGATGGAGATGGTTTTAGCGGCTTACGTCAAGTCAGGGGCAATTTCATTTGAGGCGGCAATGGGCAAGAGTGCCAA
GCCAGATGAGTTACAGCGTCTTCTTGGTGCAGCAGTTGCTAAATAA
ATGGATTTAATGATTGAAGACTTGATGGAGCAACTGATCGAAATGGGCGGCTCCGATATGCACCTTCAGGCGGGCGCTCC
AGTATACTTTCGGGTCAGTGGTAAACTCCAGGCGATTAATGAGGAGCCACTGGCACCTCAAGATTGTCAGAAATTAATTT
TTAGTATGCTGAATAATACCCAGCGTAAAGATTTGGAACAGAACTGGGAATTAGATTGCTCTTATGGGGTGAAAGGATTA
GCTCGTTTCCGAGTCAATGTCTACAAAGAACGTGGTTACTATGCAGCTTGTCTAAGGGCTTTAGCGTCTAAAATTCCTAA
TTTTGATATGTTAGGTCTACCAGATATTGTTCGGGAAATGACTCACCGACCTAGAGGAATGGTGTTAGTAACCGGACAAA
CGGGTTCGGGTAAAACGACTACGATGGCGGCAATGATTGATTTGATTAACCGCACACGAGCAGAACATATTTTGACTGTA
GAAGACCCGATTGAATATGTTTTTGCTAATATTAAAAGTTTAGTTCACCAACGTCAAAAAGGTGAGGATACTAAAAGTTT
TGCTAATGCTTTGAGAGCGGCATTACGGGAAGATCCAGATGTAATTTTGGTAGGTGAAATGCGGGACTTGGAAACAATTG
GTCTAGCAATTTCTGCTGCTGAAACAGGTCACTTGGTATTTGGAACGCTGCATACTAATTCCGCCGCTCAAACTATAGAC
CGGATGCTAGATGTATTCCCCCCTATTCAACAACCACAAATTAGGGCGCAGCTATCTAACTCTTTGGTGGCTGTATTTAG
CCAATGTTTAGTGCCTAAGAAAAATCCCAAGCCTGGGGAATATGGTCGGGTAATGGCTCAAGAAATTATGATCGTAACAC
CAGCTATTTCTAACTTAATTCGAGAAGGAAAAACCCCTCAAATTTACGGTTCTATCCAAACTGGTGCTAAGTTGGGGATG
CAGACGATGGAGATGGTTTTAGCGGCTTACGTCAAGTCAGGGGCAATTTCATTTGAGGCGGCAATGGGCAAGAGTGCCAA
GCCAGATGAGTTACAGCGTCTTCTTGGTGCAGCAGTTGCTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
53.043 |
95.568 |
0.507 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.043 |
95.568 |
0.507 |
| pilT | Pseudomonas aeruginosa PAK |
51.585 |
96.122 |
0.496 |
| pilT | Acinetobacter baumannii D1279779 |
51.297 |
96.122 |
0.493 |
| pilT | Acinetobacter baumannii strain A118 |
51.297 |
96.122 |
0.493 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
96.122 |
0.493 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.009 |
96.122 |
0.49 |
| pilT | Acinetobacter baylyi ADP1 |
50.432 |
96.122 |
0.485 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.157 |
98.615 |
0.485 |
| pilT | Neisseria gonorrhoeae MS11 |
49.263 |
93.906 |
0.463 |
| pilT | Neisseria meningitidis 8013 |
47.851 |
96.676 |
0.463 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.059 |
94.183 |
0.443 |
| pilT | Vibrio cholerae strain A1552 |
47.059 |
94.183 |
0.443 |