Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CAL6303_RS08730 | Genome accession | NC_019751 |
| Coordinates | 2149098..2150216 (+) | Length | 372 a.a. |
| NCBI ID | WP_015197480.1 | Uniprot ID | K9UY76 |
| Organism | Calothrix sp. PCC 6303 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2144098..2155216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAL6303_RS08720 (Cal6303_1794) | grpE | 2145976..2146623 (-) | 648 | WP_015197478.1 | nucleotide exchange factor GrpE | - |
| CAL6303_RS08725 (Cal6303_1795) | pilB/pilB1 | 2147041..2149053 (+) | 2013 | WP_015197479.1 | GspE/PulE family protein | Machinery gene |
| CAL6303_RS08730 (Cal6303_1796) | pilT | 2149098..2150216 (+) | 1119 | WP_015197480.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CAL6303_RS08735 (Cal6303_1797) | - | 2150366..2151586 (+) | 1221 | WP_015197481.1 | type II secretion system F family protein | - |
| CAL6303_RS08740 (Cal6303_1798) | - | 2151693..2152532 (-) | 840 | WP_015197482.1 | alpha/beta fold hydrolase | - |
| CAL6303_RS08745 (Cal6303_1799) | - | 2152641..2154143 (-) | 1503 | WP_015197483.1 | site-2 protease family protein | - |
| CAL6303_RS08750 (Cal6303_1800) | - | 2154398..2155090 (+) | 693 | WP_015197484.1 | MBL fold metallo-hydrolase | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 40759.12 Da Isoelectric Point: 7.4143
>NTDB_id=54940 CAL6303_RS08730 WP_015197480.1 2149098..2150216(+) (pilT) [Calothrix sp. PCC 6303]
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGSDPLTPDQCQRLIFSMLNNGQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGTYACCLRALSSKIPNFDKLGLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPIEFVYEPVKSLIHQRQLNEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVPKKSPKPGEFGRIMAQEIMVVTPAISNLIREGKTSQIYSAIQTGGKLGM
KTLETILADLYKAGTISFEAAMSKTSKPDEVQRLIGGVPPAAAKAAGATRAH
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGSDPLTPDQCQRLIFSMLNNGQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGTYACCLRALSSKIPNFDKLGLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPIEFVYEPVKSLIHQRQLNEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVPKKSPKPGEFGRIMAQEIMVVTPAISNLIREGKTSQIYSAIQTGGKLGM
KTLETILADLYKAGTISFEAAMSKTSKPDEVQRLIGGVPPAAAKAAGATRAH
Nucleotide
Download Length: 1119 bp
>NTDB_id=54940 CAL6303_RS08730 WP_015197480.1 2149098..2150216(+) (pilT) [Calothrix sp. PCC 6303]
ATGGAGATGATGATCGAAGATTTGATGGAGCAGATGATTGAAATGGGTGGTTCAGATATGCACCTATCTGCTGGTTTACC
TCCCTATTTCCGTATTAGTGGTAAACTCACCCCCATCGGTTCCGATCCTTTGACCCCTGACCAGTGTCAAAGGCTGATTT
TTAGTATGTTGAATAATGGTCAGCGCAAAACTTTGGAACAGACTTGGGAATTAGATTGCTCCTATGGTGTCAAAGGGCTA
GCACGTTTTCGTGTCAATGTCTATAAAGAGCGTGGTACCTATGCTTGTTGTTTACGTGCTTTGAGTTCCAAAATCCCCAA
CTTTGATAAATTGGGTCTACCTGATGTTGTTCGGGAAATGTCAGAAAAACCTAGAGGTTTAATCTTAGTTACAGGTCCAA
CTGGTTCTGGTAAAACCACTACCTTGGCAGCAATGATTGACTTGATTAATCGCACCCGTGCAGAACATATCCTCACAGTT
GAAGACCCCATTGAGTTTGTTTACGAACCTGTTAAAAGTCTGATTCACCAACGTCAATTGAATGAAGATACCAAGAGTTT
TGCCAATGCCTTAAAAGCAGCTTTGCGAGAAGATCCAGATATTATTCTGGTGGGTGAAATGCGGGATTTGGAAACAATTT
CTTTGGCAATTTCGGCAGCAGAAACTGGGCACTTAGTATTTGGTACACTTCACACTAGTTCAGCATCACAAACTGTTGAC
CGGATTATTGATGTGTTTCCCCACGAAAGACAAACTCAAGTCAGGGTACAGTTATCTAACTCACTAGTTGCAGTATTTAG
CCAAACTTTAGTTCCGAAGAAAAGCCCTAAGCCTGGTGAATTTGGTCGAATTATGGCACAGGAAATTATGGTTGTAACTC
CTGCTATTTCTAACTTAATTCGTGAAGGTAAAACATCCCAAATTTACTCGGCAATTCAGACTGGAGGTAAGTTAGGAATG
AAAACTTTGGAAACAATATTAGCTGACTTATATAAAGCCGGTACTATTTCCTTTGAAGCTGCAATGTCCAAAACTTCCAA
ACCAGATGAAGTTCAACGTCTAATTGGTGGTGTTCCTCCAGCAGCTGCAAAAGCTGCTGGTGCAACAAGAGCACATTAA
ATGGAGATGATGATCGAAGATTTGATGGAGCAGATGATTGAAATGGGTGGTTCAGATATGCACCTATCTGCTGGTTTACC
TCCCTATTTCCGTATTAGTGGTAAACTCACCCCCATCGGTTCCGATCCTTTGACCCCTGACCAGTGTCAAAGGCTGATTT
TTAGTATGTTGAATAATGGTCAGCGCAAAACTTTGGAACAGACTTGGGAATTAGATTGCTCCTATGGTGTCAAAGGGCTA
GCACGTTTTCGTGTCAATGTCTATAAAGAGCGTGGTACCTATGCTTGTTGTTTACGTGCTTTGAGTTCCAAAATCCCCAA
CTTTGATAAATTGGGTCTACCTGATGTTGTTCGGGAAATGTCAGAAAAACCTAGAGGTTTAATCTTAGTTACAGGTCCAA
CTGGTTCTGGTAAAACCACTACCTTGGCAGCAATGATTGACTTGATTAATCGCACCCGTGCAGAACATATCCTCACAGTT
GAAGACCCCATTGAGTTTGTTTACGAACCTGTTAAAAGTCTGATTCACCAACGTCAATTGAATGAAGATACCAAGAGTTT
TGCCAATGCCTTAAAAGCAGCTTTGCGAGAAGATCCAGATATTATTCTGGTGGGTGAAATGCGGGATTTGGAAACAATTT
CTTTGGCAATTTCGGCAGCAGAAACTGGGCACTTAGTATTTGGTACACTTCACACTAGTTCAGCATCACAAACTGTTGAC
CGGATTATTGATGTGTTTCCCCACGAAAGACAAACTCAAGTCAGGGTACAGTTATCTAACTCACTAGTTGCAGTATTTAG
CCAAACTTTAGTTCCGAAGAAAAGCCCTAAGCCTGGTGAATTTGGTCGAATTATGGCACAGGAAATTATGGTTGTAACTC
CTGCTATTTCTAACTTAATTCGTGAAGGTAAAACATCCCAAATTTACTCGGCAATTCAGACTGGAGGTAAGTTAGGAATG
AAAACTTTGGAAACAATATTAGCTGACTTATATAAAGCCGGTACTATTTCCTTTGAAGCTGCAATGTCCAAAACTTCCAA
ACCAGATGAAGTTCAACGTCTAATTGGTGGTGTTCCTCCAGCAGCTGCAAAAGCTGCTGGTGCAACAAGAGCACATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
53.602 |
93.28 |
0.5 |
| pilT | Pseudomonas stutzeri DSM 10701 |
52.45 |
93.28 |
0.489 |
| pilT | Acinetobacter baylyi ADP1 |
52.161 |
93.28 |
0.487 |
| pilT | Legionella pneumophila strain Lp02 |
51.873 |
93.28 |
0.484 |
| pilT | Legionella pneumophila strain ERS1305867 |
51.873 |
93.28 |
0.484 |
| pilT | Acinetobacter baumannii strain A118 |
51.297 |
93.28 |
0.478 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
93.28 |
0.478 |
| pilT | Acinetobacter baumannii D1279779 |
51.297 |
93.28 |
0.478 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.571 |
94.086 |
0.457 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.83 |
91.935 |
0.449 |
| pilT | Vibrio cholerae strain A1552 |
48.83 |
91.935 |
0.449 |
| pilT | Neisseria gonorrhoeae MS11 |
48.968 |
91.129 |
0.446 |
| pilT | Neisseria meningitidis 8013 |
48.673 |
91.129 |
0.444 |
| pilU | Acinetobacter baylyi ADP1 |
37.96 |
94.892 |
0.36 |