Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GEI7407_RS02025 | Genome accession | NC_019703 |
| Coordinates | 465970..467079 (+) | Length | 369 a.a. |
| NCBI ID | WP_015170457.1 | Uniprot ID | K9S552 |
| Organism | Geitlerinema sp. PCC 7407 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 460970..472079
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEI7407_RS02015 (GEI7407_0386) | grpE | 462615..463319 (-) | 705 | WP_015170455.1 | nucleotide exchange factor GrpE | - |
| GEI7407_RS02020 (GEI7407_0387) | pilB/pilB1 | 463915..465912 (+) | 1998 | WP_015170456.1 | GspE/PulE family protein | Machinery gene |
| GEI7407_RS02025 (GEI7407_0388) | pilT | 465970..467079 (+) | 1110 | WP_015170457.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GEI7407_RS02030 (GEI7407_0389) | - | 467360..468580 (+) | 1221 | WP_015170458.1 | type II secretion system F family protein | - |
| GEI7407_RS02035 (GEI7407_0390) | - | 469020..469655 (+) | 636 | WP_015170459.1 | hypothetical protein | - |
| GEI7407_RS19260 (GEI7407_0391) | - | 469703..471652 (-) | 1950 | WP_015170460.1 | serine/threonine-protein kinase | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 40463.64 Da Isoelectric Point: 7.0451
>NTDB_id=54847 GEI7407_RS02025 WP_015170457.1 465970..467079(+) (pilT) [Geitlerinema sp. PCC 7407]
MELMIEDLMEQLVEMGGSDLHLSAGLPPYFRISGKLTPIGDEALTAEQCQRLIFSMLNNTQRKTLEQNWELDCSYGVKGL
ARFRVNVYKDRGTYAACLRALSSKIPNFDQLGLPNVVREMTEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPIEFVYEPIKSLVHQRQLHEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RMIDVFPSERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRMLAQEIMIVTPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADLYKAGQISFEAAMSKTSKPDELQRLIGSSGPVAAKAGAAK
MELMIEDLMEQLVEMGGSDLHLSAGLPPYFRISGKLTPIGDEALTAEQCQRLIFSMLNNTQRKTLEQNWELDCSYGVKGL
ARFRVNVYKDRGTYAACLRALSSKIPNFDQLGLPNVVREMTEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPIEFVYEPIKSLVHQRQLHEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RMIDVFPSERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRMLAQEIMIVTPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADLYKAGQISFEAAMSKTSKPDELQRLIGSSGPVAAKAGAAK
Nucleotide
Download Length: 1110 bp
>NTDB_id=54847 GEI7407_RS02025 WP_015170457.1 465970..467079(+) (pilT) [Geitlerinema sp. PCC 7407]
ATGGAATTGATGATTGAAGACTTGATGGAGCAGCTAGTTGAGATGGGGGGATCGGACCTCCATCTCTCTGCGGGGTTACC
GCCATATTTTCGGATCAGCGGTAAGCTGACGCCGATCGGGGATGAGGCGTTGACGGCAGAGCAGTGTCAGCGGCTGATCT
TCAGCATGTTGAACAACACCCAGCGCAAAACGCTAGAGCAAAACTGGGAATTGGACTGCTCCTACGGGGTGAAAGGTCTC
GCGCGGTTCCGGGTCAATGTCTACAAAGATCGGGGAACCTATGCTGCTTGTTTGCGGGCGCTAAGCTCGAAGATTCCTAA
CTTTGATCAGCTCGGCTTGCCCAATGTGGTGCGCGAGATGACGGAGAAGCCGCGGGGCCTAATCCTGGTGACGGGACCAA
CGGGATCAGGAAAAACGACGACGCTGGCGGCCATGATTGACCTGATCAACCGCACGCGGGCTGAGCACATTCTGACGGTG
GAGGACCCCATCGAGTTTGTCTATGAACCGATCAAGAGTCTGGTCCACCAGCGTCAGCTCCACGAAGACACCAAGAGCTT
TGCGAACGCCCTGAAGGCCGCTCTGCGGGAAGACCCAGATATTATTCTGGTGGGCGAGATGCGGGACTTGGAGACGATCT
CCCTTGCGATTTCGGCGGCGGAAACCGGTCACTTGGTGTTTGGAACGCTGCACACGAGCTCGGCGTCTCAGACGGTGGAC
CGGATGATCGACGTGTTCCCCTCGGAGCGTCAAACCCAGGTGCGGGTGCAGCTTTCGAACTCTCTGGTGGCGGTATTTAG
CCAAACGCTGGTGTCGAAGAAAAATCCGAAGCCGGGTGAGTATGGCCGGATGCTGGCTCAAGAGATCATGATTGTGACGC
CAGCTATCTCCAACCTAATCCGCGAGGGTAAAACCGCCCAGATCTACTCGGCGATCCAAACCGGGGGCAAGTTGGGGATG
CAAACTCTGGAGAAGGTGTTGGCGGACCTGTACAAGGCTGGCCAAATCTCCTTTGAGGCTGCAATGTCGAAGACCTCTAA
GCCGGATGAACTACAGCGCCTGATCGGCTCATCAGGGCCTGTGGCCGCTAAGGCTGGGGCCGCCAAGTAA
ATGGAATTGATGATTGAAGACTTGATGGAGCAGCTAGTTGAGATGGGGGGATCGGACCTCCATCTCTCTGCGGGGTTACC
GCCATATTTTCGGATCAGCGGTAAGCTGACGCCGATCGGGGATGAGGCGTTGACGGCAGAGCAGTGTCAGCGGCTGATCT
TCAGCATGTTGAACAACACCCAGCGCAAAACGCTAGAGCAAAACTGGGAATTGGACTGCTCCTACGGGGTGAAAGGTCTC
GCGCGGTTCCGGGTCAATGTCTACAAAGATCGGGGAACCTATGCTGCTTGTTTGCGGGCGCTAAGCTCGAAGATTCCTAA
CTTTGATCAGCTCGGCTTGCCCAATGTGGTGCGCGAGATGACGGAGAAGCCGCGGGGCCTAATCCTGGTGACGGGACCAA
CGGGATCAGGAAAAACGACGACGCTGGCGGCCATGATTGACCTGATCAACCGCACGCGGGCTGAGCACATTCTGACGGTG
GAGGACCCCATCGAGTTTGTCTATGAACCGATCAAGAGTCTGGTCCACCAGCGTCAGCTCCACGAAGACACCAAGAGCTT
TGCGAACGCCCTGAAGGCCGCTCTGCGGGAAGACCCAGATATTATTCTGGTGGGCGAGATGCGGGACTTGGAGACGATCT
CCCTTGCGATTTCGGCGGCGGAAACCGGTCACTTGGTGTTTGGAACGCTGCACACGAGCTCGGCGTCTCAGACGGTGGAC
CGGATGATCGACGTGTTCCCCTCGGAGCGTCAAACCCAGGTGCGGGTGCAGCTTTCGAACTCTCTGGTGGCGGTATTTAG
CCAAACGCTGGTGTCGAAGAAAAATCCGAAGCCGGGTGAGTATGGCCGGATGCTGGCTCAAGAGATCATGATTGTGACGC
CAGCTATCTCCAACCTAATCCGCGAGGGTAAAACCGCCCAGATCTACTCGGCGATCCAAACCGGGGGCAAGTTGGGGATG
CAAACTCTGGAGAAGGTGTTGGCGGACCTGTACAAGGCTGGCCAAATCTCCTTTGAGGCTGCAATGTCGAAGACCTCTAA
GCCGGATGAACTACAGCGCCTGATCGGCTCATCAGGGCCTGTGGCCGCTAAGGCTGGGGCCGCCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
54.755 |
94.038 |
0.515 |
| pilT | Pseudomonas aeruginosa PAK |
54.755 |
94.038 |
0.515 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.913 |
93.496 |
0.504 |
| pilT | Legionella pneumophila strain Lp02 |
53.913 |
93.496 |
0.504 |
| pilT | Acinetobacter baylyi ADP1 |
53.314 |
94.038 |
0.501 |
| pilT | Acinetobacter baumannii strain A118 |
52.738 |
94.038 |
0.496 |
| pilT | Acinetobacter baumannii D1279779 |
52.738 |
94.038 |
0.496 |
| pilT | Acinetobacter nosocomialis M2 |
52.738 |
94.038 |
0.496 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.588 |
92.141 |
0.466 |
| pilT | Vibrio cholerae strain A1552 |
50.588 |
92.141 |
0.466 |
| pilT | Neisseria gonorrhoeae MS11 |
48.997 |
94.58 |
0.463 |
| pilT | Neisseria meningitidis 8013 |
48.711 |
94.58 |
0.461 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.571 |
94.851 |
0.461 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.462 |
95.122 |
0.366 |