Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CHRO_RS08470 | Genome accession | NC_019695 |
| Coordinates | 1911583..1912707 (-) | Length | 374 a.a. |
| NCBI ID | WP_015153786.1 | Uniprot ID | K9TXX1 |
| Organism | Chroococcidiopsis thermalis PCC 7203 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1906583..1917707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHRO_RS08450 (Chro_1717) | - | 1907772..1908518 (-) | 747 | WP_015153782.1 | isoprenyl transferase | - |
| CHRO_RS29505 (Chro_1718) | - | 1908932..1909540 (+) | 609 | WP_015153783.1 | GNAT family N-acetyltransferase | - |
| CHRO_RS08460 (Chro_1719) | - | 1909628..1910203 (-) | 576 | WP_015153784.1 | hypothetical protein | - |
| CHRO_RS08465 (Chro_1720) | - | 1910268..1911497 (-) | 1230 | WP_015153785.1 | type II secretion system F family protein | - |
| CHRO_RS08470 (Chro_1721) | pilT | 1911583..1912707 (-) | 1125 | WP_015153786.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CHRO_RS08475 (Chro_1722) | pilB/pilB1 | 1912839..1914848 (-) | 2010 | WP_015153787.1 | GspE/PulE family protein | Machinery gene |
| CHRO_RS08480 (Chro_1723) | grpE | 1915143..1915907 (+) | 765 | WP_015153788.1 | nucleotide exchange factor GrpE | - |
| CHRO_RS31865 | - | 1915908..1916057 (+) | 150 | WP_158631818.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 41011.05 Da Isoelectric Point: 6.6134
>NTDB_id=54794 CHRO_RS08470 WP_015153786.1 1911583..1912707(-) (pilT) [Chroococcidiopsis thermalis PCC 7203]
MELMIEDLMEEVINSGGSDLHISAGLPPYIRISGKLTPTEHEPLTAEQCQRLIFSMLNNTQRKTLEQNWELDCSYGIKGL
ARFRVNVYKDRGTYATCLRALASKIPSMETLNLPSIVREISEKPRGLVLVTGPTGSGKSTTLASMINNINTTRAEHIITV
EDPIEFVYEPIKSVIHQRQVGEDTKSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQQQIRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTAQIYSAIQTGGNLSM
QTLEKVLADQYKTGLISFEAAMSKTSKPDELQRLIGNTPGVGAKAGMRAGTSMH
MELMIEDLMEEVINSGGSDLHISAGLPPYIRISGKLTPTEHEPLTAEQCQRLIFSMLNNTQRKTLEQNWELDCSYGIKGL
ARFRVNVYKDRGTYATCLRALASKIPSMETLNLPSIVREISEKPRGLVLVTGPTGSGKSTTLASMINNINTTRAEHIITV
EDPIEFVYEPIKSVIHQRQVGEDTKSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQQQIRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTAQIYSAIQTGGNLSM
QTLEKVLADQYKTGLISFEAAMSKTSKPDELQRLIGNTPGVGAKAGMRAGTSMH
Nucleotide
Download Length: 1125 bp
>NTDB_id=54794 CHRO_RS08470 WP_015153786.1 1911583..1912707(-) (pilT) [Chroococcidiopsis thermalis PCC 7203]
ATGGAATTAATGATTGAAGACTTAATGGAAGAAGTTATTAACTCGGGTGGTTCGGACTTACACATTTCAGCAGGTTTACC
GCCATATATCCGTATCAGTGGAAAGTTGACTCCAACGGAACACGAACCACTAACAGCAGAACAGTGTCAAAGACTAATTT
TTAGTATGTTAAATAATACCCAGCGCAAAACTCTAGAACAAAACTGGGAACTTGACTGTTCTTACGGGATTAAGGGACTA
GCTCGCTTCCGCGTCAACGTCTATAAAGACCGAGGTACGTATGCCACCTGCTTGCGAGCGCTAGCCTCCAAAATTCCCAG
CATGGAAACCTTAAATTTACCCAGTATTGTGCGGGAAATCTCGGAAAAACCACGAGGATTAGTCTTGGTAACGGGACCAA
CTGGATCGGGTAAGTCTACTACCCTAGCGTCCATGATTAATAATATTAATACAACGCGGGCGGAACACATTATCACAGTT
GAAGATCCGATTGAGTTTGTCTACGAACCAATCAAGAGTGTGATCCATCAGCGTCAAGTTGGAGAAGATACAAAGAGTTT
TGCTAATGCTCTTAGAGCAGCTTTACGGGAAGATCCAGATGTAATTCTGGTAGGCGAAATGCGTGACCTAGAAACAATTC
AGTTAGCGATTTCGGCAGCGGAAACAGGACACTTAGTATTTGGTACACTACACACGAGTTCTGCGGCTCAAACTGTTGAC
CGGATGGTAGATGTATTTCCTCCAGAACAACAGCAACAAATTCGCGTCCAGTTATCTAACTCACTTGTGGCAGTATTCAG
TCAAACTCTCGTATCTAAAAAGAACCCTAAACCAGGCGAATACGGTCGGGTTATGGCTCAGGAAATTATGATTGTTACCC
CTGCTATCTCTAACTTAATTCGTGAAGGAAAAACAGCTCAAATTTACTCGGCAATTCAAACTGGAGGAAATTTGAGTATG
CAAACATTGGAAAAAGTTTTAGCAGATCAGTATAAAACTGGTCTAATTTCGTTTGAAGCAGCAATGTCTAAAACATCTAA
GCCAGATGAATTACAGCGCTTGATTGGTAATACTCCAGGAGTCGGTGCAAAAGCTGGTATGAGAGCAGGTACTTCTATGC
ATTAA
ATGGAATTAATGATTGAAGACTTAATGGAAGAAGTTATTAACTCGGGTGGTTCGGACTTACACATTTCAGCAGGTTTACC
GCCATATATCCGTATCAGTGGAAAGTTGACTCCAACGGAACACGAACCACTAACAGCAGAACAGTGTCAAAGACTAATTT
TTAGTATGTTAAATAATACCCAGCGCAAAACTCTAGAACAAAACTGGGAACTTGACTGTTCTTACGGGATTAAGGGACTA
GCTCGCTTCCGCGTCAACGTCTATAAAGACCGAGGTACGTATGCCACCTGCTTGCGAGCGCTAGCCTCCAAAATTCCCAG
CATGGAAACCTTAAATTTACCCAGTATTGTGCGGGAAATCTCGGAAAAACCACGAGGATTAGTCTTGGTAACGGGACCAA
CTGGATCGGGTAAGTCTACTACCCTAGCGTCCATGATTAATAATATTAATACAACGCGGGCGGAACACATTATCACAGTT
GAAGATCCGATTGAGTTTGTCTACGAACCAATCAAGAGTGTGATCCATCAGCGTCAAGTTGGAGAAGATACAAAGAGTTT
TGCTAATGCTCTTAGAGCAGCTTTACGGGAAGATCCAGATGTAATTCTGGTAGGCGAAATGCGTGACCTAGAAACAATTC
AGTTAGCGATTTCGGCAGCGGAAACAGGACACTTAGTATTTGGTACACTACACACGAGTTCTGCGGCTCAAACTGTTGAC
CGGATGGTAGATGTATTTCCTCCAGAACAACAGCAACAAATTCGCGTCCAGTTATCTAACTCACTTGTGGCAGTATTCAG
TCAAACTCTCGTATCTAAAAAGAACCCTAAACCAGGCGAATACGGTCGGGTTATGGCTCAGGAAATTATGATTGTTACCC
CTGCTATCTCTAACTTAATTCGTGAAGGAAAAACAGCTCAAATTTACTCGGCAATTCAAACTGGAGGAAATTTGAGTATG
CAAACATTGGAAAAAGTTTTAGCAGATCAGTATAAAACTGGTCTAATTTCGTTTGAAGCAGCAATGTCTAAAACATCTAA
GCCAGATGAATTACAGCGCTTGATTGGTAATACTCCAGGAGTCGGTGCAAAAGCTGGTATGAGAGCAGGTACTTCTATGC
ATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
53.89 |
92.781 |
0.5 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.026 |
92.781 |
0.492 |
| pilT | Legionella pneumophila strain Lp02 |
53.043 |
92.246 |
0.489 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.043 |
92.246 |
0.489 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.593 |
98.663 |
0.489 |
| pilT | Acinetobacter baumannii strain A118 |
51.585 |
92.781 |
0.479 |
| pilT | Acinetobacter baylyi ADP1 |
51.585 |
92.781 |
0.479 |
| pilT | Acinetobacter baumannii D1279779 |
51.585 |
92.781 |
0.479 |
| pilT | Acinetobacter nosocomialis M2 |
51.585 |
92.781 |
0.479 |
| pilT | Neisseria gonorrhoeae MS11 |
50.143 |
93.316 |
0.468 |
| pilT | Neisseria meningitidis 8013 |
50.143 |
93.316 |
0.468 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.706 |
90.909 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
49.706 |
90.909 |
0.452 |
| pilU | Acinetobacter baylyi ADP1 |
39.542 |
93.316 |
0.369 |