Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LEPTO7376_RS14950 | Genome accession | NC_019683 |
| Coordinates | 3322098..3323204 (+) | Length | 368 a.a. |
| NCBI ID | WP_015135002.1 | Uniprot ID | K9Q269 |
| Organism | [Leptolyngbya] sp. PCC 7376 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3317098..3328204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEPTO7376_RS14940 (Lepto7376_3008) | grpE | 3318768..3319511 (-) | 744 | WP_015135000.1 | nucleotide exchange factor GrpE | - |
| LEPTO7376_RS14945 (Lepto7376_3009) | pilB/pilB1 | 3319921..3321951 (+) | 2031 | WP_015135001.1 | GspE/PulE family protein | Machinery gene |
| LEPTO7376_RS14950 (Lepto7376_3010) | pilT | 3322098..3323204 (+) | 1107 | WP_015135002.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LEPTO7376_RS14955 (Lepto7376_3011) | - | 3323300..3324538 (+) | 1239 | WP_015135003.1 | type II secretion system F family protein | - |
| LEPTO7376_RS14960 (Lepto7376_3012) | - | 3324602..3325183 (+) | 582 | WP_015135004.1 | hypothetical protein | - |
| LEPTO7376_RS14965 (Lepto7376_3013) | - | 3325297..3326325 (+) | 1029 | WP_015135005.1 | DUF928 domain-containing protein | - |
| LEPTO7376_RS14970 (Lepto7376_3014) | - | 3326534..3327649 (+) | 1116 | WP_015135006.1 | DUF928 domain-containing protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40185.46 Da Isoelectric Point: 6.6478
>NTDB_id=54729 LEPTO7376_RS14950 WP_015135002.1 3322098..3323204(+) (pilT) [[Leptolyngbya] sp. PCC 7376]
MDVMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLAPIDDEPLSPQEAQKLIFSMLNGTQRKDLEKNWELDCSYGVKGL
ARFRVNVYRERGCYAACLRALSSKIPNFDMLGLPDIVREMAERPRGLVLVTGQTGSGKTTTMAAMLDLINRTRAEHILTV
EDPIEYVFPNNKSLFHQRQKGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTNSAAGTID
RMLDVFPPIQQPQIRAMLSNSLLAVFSQCLVQKSNPKPGEFGRAMAQEIMVVTPAIANLIREGKSAQVYSAIQTGMKLGM
QTMEQALAGLVSAGSITFEEGLAKSGKPDELQRLVGGALGGGAKMKRR
MDVMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLAPIDDEPLSPQEAQKLIFSMLNGTQRKDLEKNWELDCSYGVKGL
ARFRVNVYRERGCYAACLRALSSKIPNFDMLGLPDIVREMAERPRGLVLVTGQTGSGKTTTMAAMLDLINRTRAEHILTV
EDPIEYVFPNNKSLFHQRQKGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTNSAAGTID
RMLDVFPPIQQPQIRAMLSNSLLAVFSQCLVQKSNPKPGEFGRAMAQEIMVVTPAIANLIREGKSAQVYSAIQTGMKLGM
QTMEQALAGLVSAGSITFEEGLAKSGKPDELQRLVGGALGGGAKMKRR
Nucleotide
Download Length: 1107 bp
>NTDB_id=54729 LEPTO7376_RS14950 WP_015135002.1 3322098..3323204(+) (pilT) [[Leptolyngbya] sp. PCC 7376]
ATGGATGTAATGATCGAAGATTTGATGGAGCAACTCGTTGAAATGGGCGGCTCAGACATGCATATTCAAGCTGGAGCACC
AGTCTATTTCCGAGTTAGTGGTAAACTTGCCCCTATCGATGATGAACCGCTATCGCCCCAAGAAGCGCAAAAGCTGATTT
TCAGTATGCTCAATGGTACTCAGCGCAAAGACCTTGAGAAGAATTGGGAATTGGACTGCTCTTATGGCGTAAAAGGATTG
GCTCGTTTCCGTGTAAATGTTTATCGCGAGCGTGGTTGTTACGCTGCTTGTTTGCGAGCATTATCCTCGAAAATTCCGAA
TTTTGATATGTTGGGGCTGCCTGATATTGTGCGGGAGATGGCAGAACGTCCCCGTGGTTTAGTTTTGGTGACGGGTCAAA
CAGGTTCTGGTAAAACCACAACGATGGCGGCGATGTTGGATCTGATCAACCGCACCCGTGCTGAACATATTTTGACGGTA
GAAGACCCAATCGAATATGTTTTTCCCAATAATAAAAGTCTTTTCCACCAACGCCAAAAAGGTGAAGATACAAAGAGTTT
TGCGAATGCCCTAAAGGCTGCACTTCGGGAAGACCCAGATATTATTCTTGTGGGTGAGATGCGGGACTTGGAGACGATCT
CCCTTGCCATCTCCGCCGCTGAAACAGGGCACCTTGTTTTTGGCACGCTCCACACAAACTCCGCTGCTGGAACGATTGAC
CGGATGCTCGATGTATTCCCACCAATTCAACAGCCTCAAATTCGAGCGATGCTTTCTAATTCGCTTTTGGCAGTATTTAG
TCAATGTCTCGTCCAAAAATCTAATCCGAAACCAGGTGAGTTTGGTCGGGCAATGGCTCAGGAAATCATGGTTGTCACCC
CGGCGATCGCCAACCTAATCCGCGAAGGAAAATCGGCCCAAGTGTATTCCGCGATTCAAACTGGTATGAAATTGGGGATG
CAAACGATGGAGCAAGCCCTTGCGGGGCTAGTTTCTGCCGGATCGATTACATTTGAAGAGGGACTGGCTAAGAGCGGCAA
ACCTGATGAACTCCAAAGACTTGTTGGTGGTGCTCTTGGTGGCGGTGCAAAGATGAAGCGGCGCTAA
ATGGATGTAATGATCGAAGATTTGATGGAGCAACTCGTTGAAATGGGCGGCTCAGACATGCATATTCAAGCTGGAGCACC
AGTCTATTTCCGAGTTAGTGGTAAACTTGCCCCTATCGATGATGAACCGCTATCGCCCCAAGAAGCGCAAAAGCTGATTT
TCAGTATGCTCAATGGTACTCAGCGCAAAGACCTTGAGAAGAATTGGGAATTGGACTGCTCTTATGGCGTAAAAGGATTG
GCTCGTTTCCGTGTAAATGTTTATCGCGAGCGTGGTTGTTACGCTGCTTGTTTGCGAGCATTATCCTCGAAAATTCCGAA
TTTTGATATGTTGGGGCTGCCTGATATTGTGCGGGAGATGGCAGAACGTCCCCGTGGTTTAGTTTTGGTGACGGGTCAAA
CAGGTTCTGGTAAAACCACAACGATGGCGGCGATGTTGGATCTGATCAACCGCACCCGTGCTGAACATATTTTGACGGTA
GAAGACCCAATCGAATATGTTTTTCCCAATAATAAAAGTCTTTTCCACCAACGCCAAAAAGGTGAAGATACAAAGAGTTT
TGCGAATGCCCTAAAGGCTGCACTTCGGGAAGACCCAGATATTATTCTTGTGGGTGAGATGCGGGACTTGGAGACGATCT
CCCTTGCCATCTCCGCCGCTGAAACAGGGCACCTTGTTTTTGGCACGCTCCACACAAACTCCGCTGCTGGAACGATTGAC
CGGATGCTCGATGTATTCCCACCAATTCAACAGCCTCAAATTCGAGCGATGCTTTCTAATTCGCTTTTGGCAGTATTTAG
TCAATGTCTCGTCCAAAAATCTAATCCGAAACCAGGTGAGTTTGGTCGGGCAATGGCTCAGGAAATCATGGTTGTCACCC
CGGCGATCGCCAACCTAATCCGCGAAGGAAAATCGGCCCAAGTGTATTCCGCGATTCAAACTGGTATGAAATTGGGGATG
CAAACGATGGAGCAAGCCCTTGCGGGGCTAGTTTCTGCCGGATCGATTACATTTGAAGAGGGACTGGCTAAGAGCGGCAA
ACCTGATGAACTCCAAAGACTTGTTGGTGGTGCTCTTGGTGGCGGTGCAAAGATGAAGCGGCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
51.585 |
94.293 |
0.486 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
94.293 |
0.484 |
| pilT | Acinetobacter baylyi ADP1 |
51.297 |
94.293 |
0.484 |
| pilT | Legionella pneumophila strain Lp02 |
53.453 |
90.489 |
0.484 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.453 |
90.489 |
0.484 |
| pilT | Acinetobacter baumannii strain A118 |
51.009 |
94.293 |
0.481 |
| pilT | Acinetobacter baumannii D1279779 |
51.009 |
94.293 |
0.481 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
94.293 |
0.476 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.209 |
98.641 |
0.476 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.267 |
92.663 |
0.457 |
| pilT | Vibrio cholerae strain A1552 |
49.267 |
92.663 |
0.457 |
| pilT | Neisseria meningitidis 8013 |
48.657 |
91.033 |
0.443 |
| pilT | Neisseria gonorrhoeae MS11 |
48.657 |
91.033 |
0.443 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.177 |
95.38 |
0.364 |