Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HRE53_RS01265 | Genome accession | NZ_CP071717 |
| Coordinates | 264875..265996 (-) | Length | 373 a.a. |
| NCBI ID | WP_212661865.1 | Uniprot ID | - |
| Organism | Acaryochloris sp. 'Moss Beach' | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 259875..270996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRE53_RS01240 (HRE53_01205) | cdaA | 260743..261657 (+) | 915 | WP_212661860.1 | diadenylate cyclase CdaA | - |
| HRE53_RS01245 (HRE53_01210) | - | 261654..262407 (+) | 754 | Protein_228 | isoprenyl transferase | - |
| HRE53_RS01250 (HRE53_01215) | - | 262470..262751 (-) | 282 | WP_235108779.1 | DUF3143 domain-containing protein | - |
| HRE53_RS01255 (HRE53_01220) | - | 262942..263400 (-) | 459 | WP_235108780.1 | J domain-containing protein | - |
| HRE53_RS01260 (HRE53_01225) | - | 263585..264805 (-) | 1221 | WP_212661864.1 | type II secretion system F family protein | - |
| HRE53_RS01265 (HRE53_01230) | pilT | 264875..265996 (-) | 1122 | WP_212661865.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HRE53_RS01270 (HRE53_01235) | pilB/pilB1 | 266066..268072 (-) | 2007 | WP_235108781.1 | GspE/PulE family protein | Machinery gene |
| HRE53_RS01275 (HRE53_01240) | grpE | 268692..269480 (+) | 789 | WP_212661869.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41117.04 Da Isoelectric Point: 6.6559
>NTDB_id=547250 HRE53_RS01265 WP_212661865.1 264875..265996(-) (pilT) [Acaryochloris sp. 'Moss Beach']
MDYMIEDLMEEVVERGGSDLHLSVGLPPYIRINGKLTPTDYDPLSQEQCQRLIFSMLNNTQRKQLEQTWELDCSYGVRGL
ARFRVNVYKDRGTYAAALRALSSKIPAIETLGLPNIVREMSEKPRGLVLVTGPTGSGKTTTLASMINNINLTRAEHILTV
EDPIEFVYEPIKSLIHQRQVGEDTKSFSNALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQTQVRVQLSNSLVAVFSQTLVTRKNPKPGEFGRVMAQEIMVSTPGIANLIREGKTSQIYSAIQTGGKLGM
VTLEKVLAELYQAGSISFESAVSKTSRPDEMQRLMGAAPMGNQRGAGATSYRR
MDYMIEDLMEEVVERGGSDLHLSVGLPPYIRINGKLTPTDYDPLSQEQCQRLIFSMLNNTQRKQLEQTWELDCSYGVRGL
ARFRVNVYKDRGTYAAALRALSSKIPAIETLGLPNIVREMSEKPRGLVLVTGPTGSGKTTTLASMINNINLTRAEHILTV
EDPIEFVYEPIKSLIHQRQVGEDTKSFSNALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQTQVRVQLSNSLVAVFSQTLVTRKNPKPGEFGRVMAQEIMVSTPGIANLIREGKTSQIYSAIQTGGKLGM
VTLEKVLAELYQAGSISFESAVSKTSRPDEMQRLMGAAPMGNQRGAGATSYRR
Nucleotide
Download Length: 1122 bp
>NTDB_id=547250 HRE53_RS01265 WP_212661865.1 264875..265996(-) (pilT) [Acaryochloris sp. 'Moss Beach']
ATGGACTACATGATTGAAGACCTAATGGAAGAAGTCGTTGAGCGAGGAGGCTCTGATTTACACCTCTCAGTAGGCTTACC
TCCCTACATTCGTATCAACGGAAAATTAACTCCTACTGATTATGATCCACTGAGTCAAGAGCAATGTCAGCGTCTTATCT
TTAGCATGCTGAATAATACTCAACGAAAACAATTAGAGCAAACATGGGAATTAGATTGCTCTTACGGTGTCAGAGGCCTA
GCGCGTTTTAGGGTTAATGTCTATAAGGATCGGGGTACTTATGCTGCTGCATTACGAGCACTCAGCTCTAAGATTCCTGC
TATAGAAACGTTGGGATTACCAAATATTGTCCGAGAAATGTCTGAGAAGCCCCGTGGTTTGGTACTAGTGACTGGTCCCA
CAGGCTCGGGAAAAACAACGACCCTTGCCTCCATGATTAACAATATTAATCTAACTCGGGCTGAACATATTCTCACGGTC
GAAGATCCCATTGAATTTGTTTATGAACCTATTAAAAGCCTGATCCACCAGCGTCAAGTTGGTGAAGATACCAAGAGCTT
CTCGAATGCACTGCGGGCTGCTCTCCGTGAAGATCCAGATGTTATTCTTGTAGGGGAAATGCGGGATCTTGAAACGATTC
AACTTGCTATTTCTGCAGCAGAAACCGGTCACTTAGTTTTTGGGACACTTCATACTAGTTCAGCAGCCCAAACTGTTGAT
CGGATGGTAGATGTATTTCCGCCTGAGCAACAGACTCAAGTTCGAGTGCAATTGTCTAACTCTTTGGTGGCTGTATTTAG
CCAAACGCTAGTGACGCGGAAAAATCCGAAACCAGGTGAGTTTGGGAGAGTCATGGCACAAGAAATTATGGTATCCACTC
CCGGAATTGCTAACTTAATTCGTGAAGGAAAAACATCTCAGATATACTCTGCTATTCAAACTGGAGGAAAGTTAGGAATG
GTTACTTTAGAGAAAGTCCTAGCTGAACTCTATCAGGCTGGCTCGATTTCCTTTGAATCAGCTGTATCCAAGACATCCCG
TCCTGATGAAATGCAGCGATTAATGGGAGCAGCCCCTATGGGTAATCAACGTGGCGCTGGTGCCACTTCTTATCGGCGAT
AA
ATGGACTACATGATTGAAGACCTAATGGAAGAAGTCGTTGAGCGAGGAGGCTCTGATTTACACCTCTCAGTAGGCTTACC
TCCCTACATTCGTATCAACGGAAAATTAACTCCTACTGATTATGATCCACTGAGTCAAGAGCAATGTCAGCGTCTTATCT
TTAGCATGCTGAATAATACTCAACGAAAACAATTAGAGCAAACATGGGAATTAGATTGCTCTTACGGTGTCAGAGGCCTA
GCGCGTTTTAGGGTTAATGTCTATAAGGATCGGGGTACTTATGCTGCTGCATTACGAGCACTCAGCTCTAAGATTCCTGC
TATAGAAACGTTGGGATTACCAAATATTGTCCGAGAAATGTCTGAGAAGCCCCGTGGTTTGGTACTAGTGACTGGTCCCA
CAGGCTCGGGAAAAACAACGACCCTTGCCTCCATGATTAACAATATTAATCTAACTCGGGCTGAACATATTCTCACGGTC
GAAGATCCCATTGAATTTGTTTATGAACCTATTAAAAGCCTGATCCACCAGCGTCAAGTTGGTGAAGATACCAAGAGCTT
CTCGAATGCACTGCGGGCTGCTCTCCGTGAAGATCCAGATGTTATTCTTGTAGGGGAAATGCGGGATCTTGAAACGATTC
AACTTGCTATTTCTGCAGCAGAAACCGGTCACTTAGTTTTTGGGACACTTCATACTAGTTCAGCAGCCCAAACTGTTGAT
CGGATGGTAGATGTATTTCCGCCTGAGCAACAGACTCAAGTTCGAGTGCAATTGTCTAACTCTTTGGTGGCTGTATTTAG
CCAAACGCTAGTGACGCGGAAAAATCCGAAACCAGGTGAGTTTGGGAGAGTCATGGCACAAGAAATTATGGTATCCACTC
CCGGAATTGCTAACTTAATTCGTGAAGGAAAAACATCTCAGATATACTCTGCTATTCAAACTGGAGGAAAGTTAGGAATG
GTTACTTTAGAGAAAGTCCTAGCTGAACTCTATCAGGCTGGCTCGATTTCCTTTGAATCAGCTGTATCCAAGACATCCCG
TCCTGATGAAATGCAGCGATTAATGGGAGCAGCCCCTATGGGTAATCAACGTGGCGCTGGTGCCACTTCTTATCGGCGAT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.493 |
92.493 |
0.504 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.602 |
93.029 |
0.499 |
| pilT | Acinetobacter baylyi ADP1 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter nosocomialis M2 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter baumannii D1279779 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter baumannii strain A118 |
52.754 |
92.493 |
0.488 |
| pilT | Legionella pneumophila strain Lp02 |
52.464 |
92.493 |
0.485 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.464 |
92.493 |
0.485 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.58 |
95.71 |
0.475 |
| pilT | Neisseria meningitidis 8013 |
49.856 |
93.029 |
0.464 |
| pilT | Neisseria gonorrhoeae MS11 |
49.568 |
93.029 |
0.461 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.294 |
91.153 |
0.458 |
| pilT | Vibrio cholerae strain A1552 |
50.294 |
91.153 |
0.458 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.031 |
94.102 |
0.367 |