Detailed information NTG0045764

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: C663_RS08045
• Genome accession: NC_020244
• Coordinates: 1571328..1572350 (+)
• Length: 340 a.a.
• NCBI ID: WP_015483198.1
• Uniprot ID: -
• Organism: Bacillus subtilis XF-1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1566328..1577350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS08010 (C663_1542)	ylbE	1566627..1566866 (+)	240	WP_003232231.1	YlbE-like family protein	-
C663_RS08015 (C663_1543)	ylbF	1566982..1567431 (+)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
C663_RS08020	ylbG	1567486..1567758 (+)	273	WP_009967171.1	YlbG family protein	-
C663_RS08025 (C663_1545)	rsmD	1568082..1568636 (+)	555	WP_015483196.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C663_RS08030 (C663_1546)	coaD	1568641..1569126 (+)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
C663_RS08035 (C663_1547)	spoVV	1569137..1570363 (-)	1227	WP_015383588.1	dipicolinic acid transporter SpoVV	-
C663_RS08040 (C663_1548)	ylbK	1570544..1571326 (+)	783	WP_015383589.1	patatin family protein	-
C663_RS08045 (C663_1549)	sepM	1571328..1572350 (+)	1023	WP_015483198.1	protease DdcP	Regulator
C663_RS21870	-	1572541..1572990 (-)	450	WP_015483199.1	hypothetical protein	-
C663_RS08055 (C663_1550)	-	1573063..1574295 (-)	1233	WP_015383591.1	nucleotidyltransferase	-
C663_RS08060	-	1574292..1574477 (-)	186	WP_003232215.1	hypothetical protein	-
C663_RS08065 (C663_1551)	ylbN	1574505..1575023 (+)	519	WP_014479718.1	DUF177 domain-containing protein	-
C663_RS20630	rpmF	1575045..1575224 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
C663_RS08070 (C663_1552)	gerR	1575370..1575951 (+)	582	WP_015383592.1	sporulation specific transcriptional regulator GerR	-
C663_RS08075 (C663_1553)	ylbP	1576008..1576490 (-)	483	WP_014476736.1	N-acetyltransferase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37551.11 Da
• Isoelectric Point: 5.9932

>NTDB_id=45764 C663_RS08045 WP_015483198.1 1571328..1572350(+) (sepM) [Bacillus subtilis XF-1]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSDMKI
VPVDTMQDAIDYLNKLKAKS

Nucleotide

• Length: 1023 bp

>NTDB_id=45764 C663_RS08045 WP_015483198.1 1571328..1572350(+) (sepM) [Bacillus subtilis XF-1]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGTATTAAGGAGGAAGGCGAGTCAGATAAGGAATATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCACTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAGATATGAAGATT
GTTCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGTTAA

Domains

Predicted by InterProScan.

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.403