Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   I6H74_RS01405 Genome accession   NZ_CP066069
Coordinates   272530..273294 (-) Length   254 a.a.
NCBI ID   WP_012766408.1    Uniprot ID   A0A9X9GAR3
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 267530..278294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS01385 (I6H74_01380) purC 268803..269513 (-) 711 WP_003060240.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  I6H74_RS01390 (I6H74_01385) - 269725..271147 (+) 1423 Protein_253 IS1182 family transposase -
  I6H74_RS01395 (I6H74_01390) - 271181..271423 (-) 243 WP_003062587.1 phosphopantetheine-binding protein -
  I6H74_RS01400 (I6H74_01395) plsX 271416..272423 (-) 1008 WP_015016512.1 phosphate acyltransferase PlsX -
  I6H74_RS01405 (I6H74_01400) recO 272530..273294 (-) 765 WP_012766408.1 DNA repair protein RecO Machinery gene
  I6H74_RS01410 (I6H74_01405) - 273519..274481 (-) 963 WP_003049033.1 ribose-phosphate diphosphokinase -
  I6H74_RS01415 (I6H74_01410) - 274635..275837 (-) 1203 WP_046177573.1 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 30015.21 Da        Isoelectric Point: 5.7481

>NTDB_id=453520 I6H74_RS01405 WP_012766408.1 272530..273294(-) (recO) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MQLNESLGIVLFNRNYREDDKLVKIFTETAGKRMFFVKHISRSKLSSVIQPLTAADFIFKLNESGLSYIDDYNHVDTYQQ
INQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKTLDLMEEGLDYEVLTNIFEIQVLERFGIRINFHDCVFCHRVGL
PFDFSHHYSGVLCPEHYHKDDYRNHLDPNVIYLLDRFQTIQFDELRTISLNDEMKRKLRYFIDELYHDYVGIKLKSKTFI
DDLAKWGDIMKPKD

Nucleotide


Download         Length: 765 bp        

>NTDB_id=453520 I6H74_RS01405 WP_012766408.1 272530..273294(-) (recO) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGCAGTTAAACGAGTCATTGGGAATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTGGTCAAGATATTCAC
AGAGACAGCAGGCAAACGTATGTTTTTCGTGAAACATATTAGTCGTTCTAAACTTTCTTCCGTCATTCAACCTTTAACGG
CTGCTGACTTTATATTTAAGTTGAACGAATCAGGTCTTTCTTATATTGACGACTACAATCATGTGGATACTTATCAACAG
ATTAATCAGGACCTTTTTCGACTTTCCTATGCAAGTTATGTAGTGGCTTTGGCAGATGCCGCTATTTCAGATAATGAGCC
AGATCCTCACCTCTTTGCCTTTCTGAAAAAGACACTTGATTTAATGGAAGAGGGGTTGGATTACGAGGTTTTGACCAACA
TTTTTGAAATCCAAGTTTTAGAGCGTTTTGGGATTAGAATAAACTTTCATGACTGTGTTTTTTGTCATCGTGTCGGTTTA
CCATTTGATTTTTCACATCACTATTCGGGTGTGCTGTGCCCTGAACATTATCATAAAGATGACTACCGGAATCATCTAGA
TCCTAATGTCATCTATTTACTAGACCGTTTTCAAACCATTCAGTTTGATGAATTGAGAACCATTTCTTTAAATGATGAGA
TGAAAAGAAAACTTCGTTATTTTATTGATGAATTGTATCATGACTATGTAGGAATCAAGTTAAAAAGTAAAACGTTTATT
GATGATTTAGCTAAATGGGGCGATATTATGAAACCAAAGGACTAG

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(83-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X9GAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.821

96.85

0.618