Detailed information NTG0453517

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: I6H74_RS01305
• Genome accession: NZ_CP066069
• Coordinates: 247843..248841 (-)
• Length: 332 a.a.
• NCBI ID: WP_015057190.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1017
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 242843..253841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H74_RS01290 (I6H74_01290)	-	245075..246850 (-)	1776	WP_003059359.1	acyltransferase family protein	-
I6H74_RS01295 (I6H74_01295)	-	246847..247248 (-)	402	WP_003049089.1	MORN repeat-containing protein	-
I6H74_RS01300 (I6H74_01300)	-	247277..247708 (-)	432	WP_003059365.1	low molecular weight protein-tyrosine-phosphatase	-
I6H74_RS01305 (I6H74_01305)	ruvB	247843..248841 (-)	999	WP_015057190.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I6H74_RS01310	comS	248893..248988 (-)	96	WP_198455558.1	quorum-sensing system DWW-type pheromone	Regulator
I6H74_RS01315 (I6H74_01310)	comR	249075..249986 (-)	912	WP_115256701.1	XRE family transcriptional regulator	Regulator
I6H74_RS01320 (I6H74_01315)	purB	250128..251420 (-)	1293	WP_022554088.1	adenylosuccinate lyase	-
I6H74_RS01325 (I6H74_01320)	-	251605..253464 (-)	1860	WP_015016520.1	DUF262 domain-containing protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37274.73 Da
• Isoelectric Point: 4.5556

>NTDB_id=453517 I6H74_RS01305 WP_015057190.1 247843..248841(-) (ruvB) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MARILDNDVMGDEELVERTLRPQYLREYIGQDKVKEQLTIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFDMEIVHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
AQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVATEK
AYRHLGYPYPSK

Nucleotide

• Length: 999 bp

>NTDB_id=453517 I6H74_RS01305 WP_015057190.1 247843..248841(-) (ruvB) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGGCTAGAATTTTAGATAATGATGTAATGGGGGATGAAGAACTTGTTGAGCGAACGCTTCGTCCGCAGTATTTACGTGA
GTACATTGGGCAAGATAAGGTTAAGGAACAATTAACCATTTTTATTGAAGCGGCTAAGCTCCGTGATGAATCTTTAGATC
ATGTGTTGTTGTTTGGCCCTCCAGGTTTAGGGAAAACCACAATGGCATTTGTGATTGCTAATGAATTAGGGGTTAACTTG
AAGCAAACTTCAGGACCAGCGATTGAGAAGGCTGGTGATTTGGTAGCTATTTTGAATGATCTGGAACCAGGAGATGTGCT
CTTTATTGATGAAATTCATCGTCTGCCTATGGCAGTCGAAGAAGTATTGTACAGTGCTATGGAAGATTTTTACATCGACA
TTATGATTGGTGCTGGGGACACTAGTCGAAGTGTTCATTTGGATTTGCCACCTTTTACATTGATTGGAGCTACAACACGA
GCTGGGATGTTATCAAATCCTTTGCGAGCTCGATTTGGCATTACTGGACACATGGAGTATTATCAGGAAGCTGATTTGAC
TGAAATTGTCGAACGAACAGCCGATATTTTTGACATGGAAATTGTTCACGAAGCGGCTCAAGAGTTAGCTTGCCGTAGTC
GGGGAACACCGCGTATTGCTAATAGATTGTTAAAGCGGGTACGTGATTATGCTCAGATTGTTGGAGATGGCGTCATCACG
GCTCAGATTACAGACAAAGCCCTAACCATGCTTGATGTTGATCGAGAAGGTCTTGATTATGTAGATCAGAAGATTTTACG
CACCATGATTGAAATGTATCAGGGTGGACCTGTTGGGTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACAG
TTGAAGACATGTACGAACCTTATCTGATTCAAAAAGGATTTCTAATGCGTACACGAACTGGTCGTGTGGCGACGGAAAAA
GCCTATCGTCATCTTGGTTATCCATATCCGTCTAAGTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	89.759	100	0.898
ruvB	Streptococcus pneumoniae R6	89.458	100	0.895
ruvB	Streptococcus pneumoniae D39	89.458	100	0.895
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.061	98.795	0.593
ruvB	Helicobacter pylori 26695	50.613	98.193	0.497
ruvB	Synechocystis sp. PCC 6803	50	95.783	0.479