Detailed information NTG0453519

Bioinformatically predicted

Overview

• Name: comYD
• Type: Machinery gene
• Locus tag: FOC72_RS09175
• Genome accession: NZ_CP054570
• Coordinates: 1915471..1915905 (-)
• Length: 144 a.a.
• NCBI ID: WP_032914279.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain FDAARGOS_770
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1910471..1920905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC72_RS09140 (FOC72_09140)	-	1910492..1911130 (-)	639	WP_002896761.1	CPBP family glutamic-type intramembrane protease	-
FOC72_RS09145 (FOC72_09145)	-	1911248..1911997 (-)	750	WP_002896762.1	CPBP family intramembrane glutamic endopeptidase	-
FOC72_RS09150 (FOC72_09150)	-	1912141..1913334 (-)	1194	WP_002896763.1	acetate kinase	-
FOC72_RS09155 (FOC72_09155)	comYH	1913371..1914336 (-)	966	WP_002896764.1	class I SAM-dependent methyltransferase	Machinery gene
FOC72_RS09160 (FOC72_09160)	comGG	1914418..1914810 (-)	393	WP_002896765.1	competence type IV pilus minor pilin ComGG	-
FOC72_RS09165 (FOC72_09165)	comGF/cglF	1914791..1915228 (-)	438	WP_002896766.1	competence type IV pilus minor pilin ComGF	Machinery gene
FOC72_RS09170 (FOC72_09170)	comGE/cglE	1915212..1915445 (-)	234	WP_002896767.1	competence type IV pilus minor pilin ComGE	Machinery gene
FOC72_RS09175 (FOC72_09175)	comYD	1915471..1915905 (-)	435	WP_032914279.1	competence type IV pilus minor pilin ComGD	Machinery gene
FOC72_RS09180 (FOC72_09180)	comYC	1915865..1916182 (-)	318	WP_002896769.1	competence type IV pilus major pilin ComGC	Machinery gene
FOC72_RS09185 (FOC72_09185)	comYB	1916182..1917216 (-)	1035	WP_270623281.1	competence type IV pilus assembly protein ComGB	Machinery gene
FOC72_RS09190 (FOC72_09190)	comYA	1917146..1918087 (-)	942	WP_002896773.1	competence type IV pilus ATPase ComGA	Machinery gene
FOC72_RS09195 (FOC72_09195)	-	1918217..1918597 (-)	381	WP_002896774.1	DUF1033 family protein	-
FOC72_RS09200 (FOC72_09200)	-	1918623..1918850 (-)	228	WP_002896775.1	hypothetical protein	-
FOC72_RS09205 (FOC72_09205)	-	1919016..1920122 (-)	1107	WP_002896776.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16384.77 Da
• Isoelectric Point: 9.7563

>NTDB_id=453519 FOC72_RS09175 WP_032914279.1 1915471..1915905(-) (comYD) [Streptococcus sanguinis strain FDAARGOS_770]
MENTVAKLKRLPIKAFTLLESLLVLFVVSFLLLGLSGSVRAGFNQVQEQLFFLEFERLYQETQRLSLAGHQKLSLKISGR
QISNGYQELDFPQTLQEHEQQVIQFDRSGGNSSLSKITFQTEDRTVVYQLYMGNGKFKKTTSSG

Nucleotide

• Length: 435 bp

>NTDB_id=453519 FOC72_RS09175 WP_032914279.1 1915471..1915905(-) (comYD) [Streptococcus sanguinis strain FDAARGOS_770]
ATGGAAAACACAGTGGCGAAACTCAAGCGGTTGCCAATTAAGGCTTTTACACTGCTGGAAAGTCTCCTCGTTCTTTTTGT
TGTTAGTTTTCTACTACTAGGATTATCTGGATCGGTAAGGGCTGGCTTCAATCAGGTTCAAGAGCAACTCTTCTTTTTAG
AATTTGAGCGGCTCTACCAGGAGACGCAGAGGTTGAGCTTAGCCGGTCATCAGAAGCTTTCTCTCAAGATTTCAGGACGT
CAGATTTCCAATGGCTATCAAGAGCTGGACTTTCCACAAACTTTGCAGGAACATGAGCAGCAGGTCATTCAGTTTGACCG
ATCCGGTGGGAATTCATCACTCAGCAAAATTACTTTTCAGACGGAGGACAGGACAGTTGTTTACCAGCTTTATATGGGCA
ACGGAAAGTTTAAAAAGACGACATCTTCAGGCTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYD	Streptococcus gordonii str. Challis substr. CH1	58.451	98.611	0.576
comGD/cglD	Streptococcus mitis NCTC 12261	58.333	91.667	0.535
comGD/cglD	Streptococcus pneumoniae Rx1	59.055	88.194	0.521
comGD/cglD	Streptococcus pneumoniae D39	59.055	88.194	0.521
comGD/cglD	Streptococcus pneumoniae R6	59.055	88.194	0.521
comGD/cglD	Streptococcus mitis SK321	59.055	88.194	0.521
comGD/cglD	Streptococcus pneumoniae TIGR4	58.268	88.194	0.514
comYD	Streptococcus mutans UA140	48.855	90.972	0.444
comYD	Streptococcus mutans UA159	48.855	90.972	0.444