Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | M594_RS00900 | Genome accession | NZ_CP047883 |
| Coordinates | 181330..181653 (+) | Length | 107 a.a. |
| NCBI ID | WP_000738641.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain S022-V3-A4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 176330..186653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M594_RS00880 (M594_00900) | nagA | 177639..178790 (+) | 1152 | WP_033687416.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| M594_RS00885 (M594_00905) | - | 178982..179347 (+) | 366 | WP_173875725.1 | DUF1033 family protein | - |
| M594_RS00890 (M594_00910) | comGA/cglA/cilD | 179423..180364 (+) | 942 | WP_173875726.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M594_RS00895 (M594_00915) | comGB/cglB | 180312..181328 (+) | 1017 | WP_153209728.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M594_RS00900 (M594_00920) | comGC/cglC | 181330..181653 (+) | 324 | WP_000738641.1 | comG operon protein ComGC | Machinery gene |
| M594_RS00905 (M594_00925) | comGD/cglD | 181616..181996 (+) | 381 | WP_173875727.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M594_RS00910 (M594_00930) | comGE/cglE | 182013..182315 (+) | 303 | WP_153209718.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| M594_RS00915 (M594_00935) | comGF/cglF | 182278..182739 (+) | 462 | WP_173875728.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M594_RS00920 (M594_00940) | comGG/cglG | 182717..183130 (+) | 414 | WP_173875729.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| M594_RS00925 (M594_00945) | - | 183163..183750 (+) | 588 | WP_173875730.1 | class I SAM-dependent methyltransferase | - |
| M594_RS00930 (M594_00950) | comYH | 183811..184764 (+) | 954 | WP_173875731.1 | class I SAM-dependent methyltransferase | Machinery gene |
| M594_RS00935 (M594_00955) | - | 184814..186004 (+) | 1191 | WP_084886490.1 | acetate kinase | - |
| M594_RS00940 (M594_00960) | rnpA | 186154..186525 (+) | 372 | WP_000739245.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 11958.09 Da Isoelectric Point: 9.9097
>NTDB_id=418226 M594_RS00900 WP_000738641.1 181330..181653(+) (comGC/cglC) [Streptococcus mitis strain S022-V3-A4]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=418226 M594_RS00900 WP_000738641.1 181330..181653(+) (comGC/cglC) [Streptococcus mitis strain S022-V3-A4]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTTACACTTGTGGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTAGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGAGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTTACACTTGTGGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTAGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGAGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus mitis SK321 |
93.204 |
96.262 |
0.897 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae D39 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae R6 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
90.291 |
96.262 |
0.869 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
69.524 |
98.131 |
0.682 |
| comYC | Streptococcus mutans UA140 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus mutans UA159 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus suis isolate S10 |
70.37 |
75.701 |
0.533 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.455 |
94.393 |
0.514 |
| comGC | Staphylococcus aureus MW2 |
51.163 |
80.374 |
0.411 |
| comGC | Staphylococcus aureus N315 |
51.163 |
80.374 |
0.411 |